Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4871 ATGTTGAAAATGGCAGTACGTTGGAATTGGAGGCCACTCTCTTCCCTCCCTCTACCTCATTTCACAAACAAAAACCTCCACACACCAAACCCTAATCTTCGATTAACCACCTCCAACCTCTTTTCTTCTGCTTCTCTGCAAACCTTACCTCCTCTCAATGGCGAACTGGACCCATACCTCCGCTGTTCCCTGCCGCAGAACCCACTCCGAGTCGCCGTCCTTGTCAGCGGAGGCGTCGACAGCAGCGTCGCTCTCCGTCTCCTTCACGCCGCCGGTCATTCCTGCACCGCTTTCTATCTCAAGATATGGTTCCAAGAAGACTTTGAGAACTTCTGGTCGGAATGCCCTTGGGAAGATGATTTGAAATATGCTAAAGACGTTTGCAATCAGATTGAAGTACCATTAGAAGTTGTTCATTTGACAGATGAATACTGGAAAAACGTGGTTTCTTACATTATTGAAGAGTATCGGTGTGGTCGAACTCCGAACCCAGATGTTCTTTGCAATACAAGAATAAAATTTGGTGCGTTTTTGGATGCAATTGGTGGTATGGGTTTTGACTATGTTGCCTCTGGTCATTATGCAAAGGTTGTCCATTCATTTGTGGATAAGACAGATGGCGCTTCTATTCTAGAACTATCACAAGACATGGTAAAGGATCAAACTTACTTCTTATCCCACCTATCACAGTCCCAGCTGAAGCGACTTCTTTTTCCACTTGGTTGTATTCCCAAGGATGAAGTCCGCAAGCTTGCCACAAAATTTGATCTTCCAAATAAGGATAGGAAGGATTCCCAGGGAATATGCTTTTTGGGCAAGATAAAATTCAGTGAATTTGTTGCAAGACATATTGGGGAAAAAGAAGGTATCATACTAGAAGCTGAGACAGGTGATTTCCTTGGCAAACATAGGGGCTTCTGGTTTTATACTATAGGTCAACGCCAGGGTCTACGGCTACCTGGAGGTCCATGGTATGTTGTTGAAAAGGATGTAAAAAATAACGTAGTTTTTGTGTCCAGAAACTACTTTTCTTTGGACAAAAGAAGGCGCATATTCCGTGTTGGCTCTTTCAAATGGCTTAGTGGGTTACCCCCTAAGCAGACAAGTCAGCTTCGATGCAAGGTGAGACATGGTCCCGGGTTCTATGATTGTATCTTACAAATGGAACTTGAAGGAGATGACTTAATTGACTCTGCCATCGTTAGCATATCTGAAGATGATCAAGGCCTAGCAGCTGGACAGTTCACAGCCTTCTATGAGGGAAGAACATGCATTGGTTCTGGTGTGATTTTGGAGTCCGGGAATGATCAAACTTATCCTGTATGTGCAAAAGCTTTAGAAATTGCAAGAATGGAAGATAAATCCAAGATTGGGAATCCGGTAAAGATAAAAGTTAAACCAGATAACCCACAAGAAGTGTGTGATTCCACAGAATTGGCAAGTAAAACTTCATAG 1455 0.4337 MLKMAVRWNWRPLSSLPLPHFTNKNLHTPNPNLRLTTSNLFSSASLQTLPPLNGELDPYLRCSLPQNPLRVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSECPWEDDLKYAKDVCNQIEVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFLDAIGGMGFDYVASGHYAKVVHSFVDKTDGASILELSQDMVKDQTYFLSHLSQSQLKRLLFPLGCIPKDEVRKLATKFDLPNKDRKDSQGICFLGKIKFSEFVARHIGEKEGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSLDKRRRIFRVGSFKWLSGLPPKQTSQLRCKVRHGPGFYDCILQMELEGDDLIDSAIVSISEDDQGLAAGQFTAFYEGRTCIGSGVILESGNDQTYPVCAKALEIARMEDKSKIGNPVKIKVKPDNPQEVCDSTELASKTS* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4871 484 PANTHER - 49 467 - -
Psa7g4871 484 Pfam Aminomethyltransferase beta-barrel domain 350 430 IPR046885 -
Psa7g4871 484 CDD tRNA_Me_trans 70 430 IPR004506 GO:0008033|GO:0016740
Psa7g4871 484 Hamap tRNA-specific 2-thiouridylase MnmA [mnmA]. 69 431 IPR004506 GO:0008033|GO:0016740
Psa7g4871 484 PANTHER BNAA08G29550D PROTEIN 49 467 - -
Psa7g4871 484 TIGRFAM trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 70 430 IPR004506 GO:0008033|GO:0016740
Psa7g4871 484 Pfam tRNA methyl transferase HUP domain 70 273 - -
Psa7g4871 484 Gene3D Translation factors 349 439 - -
Psa7g4871 484 Gene3D HUPs 60 282 IPR014729 -
Psa7g4871 484 Gene3D - 283 342 IPR023382 GO:0016783
Psa7g4871 484 Pfam tRNA methyl transferase PRC-barrel domain 278 340 IPR046884 -
Psa7g4871 484 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 70 315 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4871 K21027 - gmx:100785275 859.366