Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4829 ATGCATCAGCCATGTATCTGTGCAGCAGCCCCAAATCCAACTGCTACTCTTCCACTACACTCAAACATCAATGTTTCCTTTTCACCTACAAACACCTCTTTCAACCTTCCAAAACCATCACAATCCAAACGCATGACAAAGATTAGGAACCAACCCATGTTAAATTCGCACGCCCAACCACACCATAGGTGGTCTCTAAACGGCATGACAGCTCTTGTCACCGGTGGAACTCGCGGAATTGGGCATGCCATTGTCGAGGAATTGACGGGTTTTGGTGCCAAAGTTCATACCTGTGCCAGAAATGAAAATGATCTCAATAAGTGCCTCAAGGATTGGAATCATTTGGGTTTTGATGTTACTGGCTCAATTTGTGATGTGTCTGTTCCACAACAGAGGGAGATGCTCATGGAGGATGTTTCCTCTGTCTTCCATGGGAAACTCAACATCCTAATAAACAATGTTGGGACAAACATTCGGAAACCAATGACAGACTTCACAGCTGAGGAGTTTTCAAGTCTCATTGATACCAATTTAGGATCCACCTTTCATATCTGCCAACTTGCATATCCACTTCTAAAAGCGTCGGGAGTGGGTAGTGTTGTTTTTATCTCTTCAGTTTCTGGTTTTGTCTCACTGAAGTCAATGTCTGTTCAAGGAGCAACAAAAGGGGCAATTAATCAACTTACAAAAAGTCTAGCTTGTGAGTGGGCAAAAGACAACATAAGGAGTAATGCAGTTGCACCTTGGTACATCAGAACTTCGATGGTAGAGCAAGTTCTGAGCAACAAAGACTATTTAGAAGAGGTGTACTCTCGAACTCCGCTCGAACGCCTAGGAGATCCGGCCGAAGTGTCTTCTGTTGTTGCCTTTCTTTGCTTACCAGCATCGTCATACATCACTGGTCAGATTATATGTGTTGATGGAGGAATGTCTATCAATGGTTTCTCCCCGACGCAGATCTAA 963 0.4382 MHQPCICAAAPNPTATLPLHSNINVSFSPTNTSFNLPKPSQSKRMTKIRNQPMLNSHAQPHHRWSLNGMTALVTGGTRGIGHAIVEELTGFGAKVHTCARNENDLNKCLKDWNHLGFDVTGSICDVSVPQQREMLMEDVSSVFHGKLNILINNVGTNIRKPMTDFTAEEFSSLIDTNLGSTFHICQLAYPLLKASGVGSVVFISSVSGFVSLKSMSVQGATKGAINQLTKSLACEWAKDNIRSNAVAPWYIRTSMVEQVLSNKDYLEEVYSRTPLERLGDPAEVSSVVAFLCLPASSYITGQIICVDGGMSINGFSPTQI* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4829 320 PANTHER TROPINONE REDUCTASE 42 319 IPR045000 GO:0016491
Psa7g4829 320 PANTHER TROPINONE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC 42 319 - -
Psa7g4829 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 68 313 IPR036291 -
Psa7g4829 320 PRINTS Glucose/ribitol dehydrogenase family signature 70 87 IPR002347 -
Psa7g4829 320 PRINTS Glucose/ribitol dehydrogenase family signature 145 156 IPR002347 -
Psa7g4829 320 PRINTS Glucose/ribitol dehydrogenase family signature 192 208 IPR002347 -
Psa7g4829 320 PRINTS Glucose/ribitol dehydrogenase family signature 218 237 IPR002347 -
Psa7g4829 320 PRINTS Glucose/ribitol dehydrogenase family signature 239 256 IPR002347 -
Psa7g4829 320 PRINTS Glucose/ribitol dehydrogenase family signature 274 294 IPR002347 -
Psa7g4829 320 Pfam Enoyl-(Acyl carrier protein) reductase 77 311 - -
Psa7g4829 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 156 IPR002347 -
Psa7g4829 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 198 206 IPR002347 -
Psa7g4829 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 218 237 IPR002347 -
Psa7g4829 320 Gene3D - 59 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4829 Psa-Chr7 419581528 419583893 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4829 63 316 Miscellaneous Gene Families AT2G29290 62.598 8.58e-119 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4829 K08081 - gmx:100799534 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4829 7 419581528 419583893 Psa7g4829 7 419581528 419583893 ECH