Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4828 ATGGCATCATCAACTACTCTCTTCAATTTCAAACCACTTCACCATCAAAGAATAATAACAAAGTCAAAACCTCCGTTTTCTTCTCCGCGCTTCCTTTCTTCTTCCATTAACCATCATTCCTCGCCAACACGTGTCTGTTTTCCACTTCTCACCTCTCACTCTATTCATAACCGCAAATTCCATGTTCGAGCGCAGAAGGAGTATTCTGCTGGGAGCAATTCTGAGTCGGTTGCTTCTGATGAAACTTACCAAGAGGAATTTTCTTGGTCTTCTGTGATTCTTCCGTTTGTGTTCCCTGCATTGGGTGGCTTGTTATTTGGTTATGATATTGGTGCCACGTCCGGTGCTACGATTTCGCTGCAGTCACCGGAGCTTAGCGGTATCGCTTGGTCCAATCTTTCTTCCGTTCAGCTTGGTCTTGTGGTCAGTGGTTCCCTATATGGGGCTCTTCTTGGCTCACTTCTTGCTTTTGCAATTGCTGATTTCATTGGGAGGAAGCGACAGCTAATCGGCGCGGCCTTGTTGTATCTACTTGGCAGTGCAATCACTGCCACTGCACCGGAACTTGGTGTTCTCTTAGCAGGAAGGCTGATTTATGGACTTGGTATAGGTCTGGCCATGCATGGAGCTCCTTTATACATTGCAGAAACATGTCCATCTCAAATCCGCGGGACTCTAGTATCATTAAAAGAACTCTTCATTGTCTTGGGTATTCTGTTGGGTTATTTTGTGGGAAGCTTTCAGATTACTACAGTTGGTGGATGGCGATTCATGTATGGATTTAGTGCTCCGCTTGCTGTGTTAATGGGGCTCGGAATGTGGACTCTCCCCGCCTCTCCTCGATGGTTGCTTCTCAAAGCAGTACAAGGAAAAGGTTCTTTTCAAGATTTAAAGGAGAAGGCAATTGTTTCCCTTAGCAAATTAAGAGGCCGACCACCCGGTGACAAAGAATCTGAGAAACAGATAGAAGAGAGCATCGTCTCATTGAAGTCAGCGTATGAAGATCAAGAATCCGAGGCGAATTTCTTAGAGGTGTTTCAGGGTCCCAATCTGAAAGCGTTCATAATCGGTGGGGGGCTAGTATTATTTCAACAGATAACAGGTCAGCCTAGTGTTCTGTATTATGCAGGTCCTATTCTTCAGAGTGCTGGATTTTCTGCCGCAGCCGACGCGGCTAAAGTTTCAGTTGTTATTGGCTTATTCAAGTTAGTAATGACATCGGTTGCTGTTCTAAAAGTAGATGATTTGGGGAGAAGACCTCTTCTGATTGGAGGTGTCAGTGGCATTGCCCTATCTTTAGTTCTCCTTTCCGCTTATTATAAATTCCTCGGAGGGTTACCAATTGTTGCTGTTGCCGCTTTACTTCTTTACGTTGGTTGCTACCAGATATCGTTTGGGCCGATAAGTTGGCTTATGGTATCGGAAATCTTCCCACTTCGCACTAGAGGACGGGGGATTAGTATGGCTGTTCTTACCAACTTCGCTGCCAATGCTGTTGTTACCTTTGCATTCTCACCACTAAAGGAGTATCTAGGAGCAGATAACCTTTTTCTCCTTTTTGCGGCCATTGCTTTAGTGTCACTTGTGTTCATTGTAACGTCTGTCCCGGAAACAAAAGGCTTGAGCTTAGAAGACATTGAATCCAAAATCTTGAAGTGA 1659 0.4485 MASSTTLFNFKPLHHQRIITKSKPPFSSPRFLSSSINHHSSPTRVCFPLLTSHSIHNRKFHVRAQKEYSAGSNSESVASDETYQEEFSWSSVILPFVFPALGGLLFGYDIGATSGATISLQSPELSGIAWSNLSSVQLGLVVSGSLYGALLGSLLAFAIADFIGRKRQLIGAALLYLLGSAITATAPELGVLLAGRLIYGLGIGLAMHGAPLYIAETCPSQIRGTLVSLKELFIVLGILLGYFVGSFQITTVGGWRFMYGFSAPLAVLMGLGMWTLPASPRWLLLKAVQGKGSFQDLKEKAIVSLSKLRGRPPGDKESEKQIEESIVSLKSAYEDQESEANFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADAAKVSVVIGLFKLVMTSVAVLKVDDLGRRPLLIGGVSGIALSLVLLSAYYKFLGGLPIVAVAALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISMAVLTNFAANAVVTFAFSPLKEYLGADNLFLLFAAIALVSLVFIVTSVPETKGLSLEDIESKILK* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4828 552 Pfam Sugar (and other) transporter 98 547 IPR005828 GO:0016021|GO:0022857|GO:0055085
Psa7g4828 552 PRINTS Sugar transporter signature 103 113 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g4828 552 PRINTS Sugar transporter signature 193 212 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g4828 552 PRINTS Sugar transporter signature 364 374 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g4828 552 PRINTS Sugar transporter signature 451 472 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g4828 552 PRINTS Sugar transporter signature 474 486 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g4828 552 CDD MFS_GLUT10_12_Class3_like 98 546 - -
Psa7g4828 552 ProSitePatterns Sugar transport proteins signature 2. 198 223 IPR005829 GO:0016021|GO:0022857|GO:0055085
Psa7g4828 552 ProSiteProfiles Major facilitator superfamily (MFS) profile. 95 539 IPR020846 GO:0022857
Psa7g4828 552 TIGRFAM SP: MFS transporter, sugar porter (SP) family 85 546 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g4828 552 Coils Coil 319 339 - -
Psa7g4828 552 Gene3D MFS general substrate transporter like domains 86 550 IPR036259 -
Psa7g4828 552 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 3, CHLOROPLASTIC 42 552 - -
Psa7g4828 552 ProSitePatterns Sugar transport proteins signature 1. 156 173 IPR005829 GO:0016021|GO:0022857|GO:0055085
Psa7g4828 552 SUPERFAMILY MFS general substrate transporter 81 547 IPR036259 -
Psa7g4828 552 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 42 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4828 Psa-Chr7 419436049 419439183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4828 8 552 Organic Solute Cotransporters AT5G59250 71.818 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4828 - - gmx:100809316 857.055