Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4805 ATGATTCTCACTGTTCCTTCATCACAAGCCCTTTTTGGTGCCTTTCTTTTTGCCACCAGTTTCTTCTGGACTTTGCCCGAACCTGTTCTTGCTACTTCAAATAGTGCAAGCGTTACAAGACACTACAAATTCGACATAAAACTCGCAAACGTTACAAGGCTGTGTCACACGAAAAGCATAGTTACTGTAAATGGAAAGTTTCCGGGTCCTCGAATTGTTGTAAGAGAAGGGGATAGATTATTGGTTAAGGTTGTTAATCATGTTCCAAACAATATCACTTTGCATTGGCATGGAGTGAGACAGCTTGGTAGTGGTTGGTCGGATGGTCCATCATACATAACTCAATGCCCCATTAAAACAGGTCAGAATTATGTGTACAATTTCACCATTGTTGGACAAAGAGGAACTCTTTTCTGGCATGCTCATTTCTCATGGTTAAGAGCTACTCTCTATGGACCTCTCATTCTTCTTCCATCCCACAACCAATCTTATCCTTTTCAAAAACCCTACAAGGAAGTCCCCATCCTCTTTGGTGAGTGGTGGAATGCAGATCCTGAAGCTGTTATTGCACAAGCTCTTCAGACAGGGGGTGGCCCAAATGTTTCTGATGCATACACCATTAATGGCCTTCCTGGACCTCTTTATAATTGCTCCAAAGATACATACAAATTGAAGGTGAAACCAGGAAAAACGTATCTACTACGTTTAATCAACGCTGCACTTAATGATGAACTCTTTTTCACCATAGCGAACCACACCTTAATCGTCGTCGAAGCAGATGCATCTTACGTTAAACCATTCGAATCCGACACCATCCTACTTGGACCAGGGCAAACCACAAATGTTTTGTTAAAAACAAAACCAAATTATCCAAATTCCACTTTTTTCATGCTAGCTAGACCATATTTCACCGGCACGGGCACTTTCGACAATTCCACGGTAGCTGGAATTTTAGAATACACTAAACCATATAATAATCAAACAATTATCACTAATCTTCCGATTATAAAACCTTCACTTCCATCCATCAATGATACTAATTTTGTTGCTAATTTCAGTAACAAATTTCTTAGCTTGAATAGTCCTAAATACCCTGCAAATGTGCCTAAAACTATTGACAAGAACTTTTTCTTTACCGTGGGACTTGGAACTAGTCCTTGCCCGAAAAACCAAACATGTCAAGGACCAAATAATAGTTCGAAATTTGCAGCTTCAATGAACAATGAGTCATTTGCTTTACCTTCTATAGCACTTCTTCAACAACATTATTTCTCCGGAGAAGCTAATAACGGTAGTAGCTATACGACCGATTTTCCGGGCGTTCCTCTTCGGCCGTTTAATTATACCGGAACTCCTCCGAATAACACTATGGTTAGTAATGGAACAAAGACAGTGGTGATACCTTATAACACTAGAGTTCAGGTGGTGTTGCAGGAGACAAGCATTTTGGGAGCTGAAAGCCATCCTTTGCATCTTCATGGGTTTAATTTTTTTGTTGTTGGTCAAGAGGAAACTGTTGCTGTTCCTTCTGGTGGTTGGGTTGCAATAAGGTTCCTTGCTGATAATCCAGGTGTTTGGTTGATGCATTGCCACTTTGATGTGCACCTTAGTTGGGGATTGAGGATGGCTTGGATTGTTGAGGATGGAGAGCTCCCTAATCAGAAATTGCCTCCTCCTCCTAAGGATCTTCCCAAATGTTGA 1701 0.408 MILTVPSSQALFGAFLFATSFFWTLPEPVLATSNSASVTRHYKFDIKLANVTRLCHTKSIVTVNGKFPGPRIVVREGDRLLVKVVNHVPNNITLHWHGVRQLGSGWSDGPSYITQCPIKTGQNYVYNFTIVGQRGTLFWHAHFSWLRATLYGPLILLPSHNQSYPFQKPYKEVPILFGEWWNADPEAVIAQALQTGGGPNVSDAYTINGLPGPLYNCSKDTYKLKVKPGKTYLLRLINAALNDELFFTIANHTLIVVEADASYVKPFESDTILLGPGQTTNVLLKTKPNYPNSTFFMLARPYFTGTGTFDNSTVAGILEYTKPYNNQTIITNLPIIKPSLPSINDTNFVANFSNKFLSLNSPKYPANVPKTIDKNFFFTVGLGTSPCPKNQTCQGPNNSSKFAASMNNESFALPSIALLQQHYFSGEANNGSSYTTDFPGVPLRPFNYTGTPPNNTMVSNGTKTVVIPYNTRVQVVLQETSILGAESHPLHLHGFNFFVVGQEETVAVPSGGWVAIRFLADNPGVWLMHCHFDVHLSWGLRMAWIVEDGELPNQKLPPPPKDLPKC* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4805 566 Gene3D - 26 157 IPR008972 -
Psa7g4805 566 Pfam Multicopper oxidase 48 158 IPR011707 GO:0005507
Psa7g4805 566 Gene3D - 388 566 IPR008972 -
Psa7g4805 566 Pfam Multicopper oxidase 172 322 IPR001117 -
Psa7g4805 566 SUPERFAMILY Cupredoxins 35 190 IPR008972 -
Psa7g4805 566 ProSitePatterns Multicopper oxidases signature 2. 529 540 IPR002355 GO:0005507
Psa7g4805 566 Pfam Multicopper oxidase 449 549 IPR011706 GO:0005507|GO:0016491
Psa7g4805 566 SUPERFAMILY Cupredoxins 369 566 IPR008972 -
Psa7g4805 566 CDD CuRO_2_LCC_plant 173 320 IPR034285 -
Psa7g4805 566 PANTHER LACCASE 504 566 - -
Psa7g4805 566 PANTHER LACCASE 34 502 - -
Psa7g4805 566 CDD CuRO_1_LCC_plant 42 158 IPR034288 GO:0005507
Psa7g4805 566 Gene3D - 170 361 IPR008972 -
Psa7g4805 566 TIGRFAM laccase: laccase 39 502 IPR017761 GO:0046274|GO:0048046|GO:0052716
Psa7g4805 566 ProSitePatterns Multicopper oxidases signature 1. 524 544 IPR033138 -
Psa7g4805 566 SUPERFAMILY Cupredoxins 166 359 IPR008972 -
Psa7g4805 566 PANTHER MULTI-COPPER OXIDASE 504 566 IPR045087 -
Psa7g4805 566 PANTHER MULTI-COPPER OXIDASE 34 502 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4805 Psa-Chr7 416865143 416867915 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4805 K05909 - gmx:100811833 945.266