Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4772 ATGGCCGTCAACGATGCTGATCAATCTCATAAAGCTCACAGGACCCGTCAAGCCGGTCCCAAGAAGAAGAACAAGTCTAAGAAGAAGCACGATGCCGATGACGGTCAGATTATGCAAAACCCCAAAGCTTTCGGTTTCTCCTCATCCAAAAAAGTCAAGCGATTACAATCACGCGCCGTCGAGAAAGAACAGCGACGCCTTCATGTTCCCATCATCGATCGCACTTACGGTGAAGCTCCTCCATTCGTCATTGTCGTGCACGGTCCTCCCCAGGTTGGAAAGTCACTTTTGATTAAGTCTTTGATTAAGCATTACACTAAGCATAACTTGCCTGATGTTCGAGGTCCAATTACAATCGTATCAGGAAAGCAAAGGCGGCTGCAGTTTGTGGAGTGTCCAAATGATATCAATGGCATGTTAGATGCAGCCAAGTTTGCGGATCTAGCACTTCTTCTTATAGATGGAAGTTATGGTTTTGAAATGGAAACATTTGAATTTCTTAATATTATGCAAGTTCATGGGTTCCCAAAGGTCATGGGGGTTCTTACTCATCTTGATGGATTCAAGGATGTTAAAAAGTTGAGGAAAACAAAACAACGACTCAAACACCGGTTTTGGACCGAAATATATGACGGAGCTAAATTGTTTTACTTATCAGGCCTTATTAATGGAAAGTATGTCAAGCGTGAAGTTCACAATCTGGCTCGGTTCATATCAGTCATGAAGTTTCATCCTTTATCTTGGCGAACTACCCATCCCTATGTTTTGGTGGATCGTTTTGAAGATATCACTCCTCCTGAACAAGTGCATGCAAATATAAGATGTGACAGAAAAGTCACTCTTTATGGCTATCTTAGAGGTTGTAACATGAAAAAGGGCAATAAGGTGCACATAGCTGGAGTGGGCGATTATGGTTTAGCTCATGTAACTGGTTTGCCCGATCCATGCCCTCTCCCTTCTGCTGCCAAAAAGAAAGGACTGCGTGATAAAGAGAAATTGTTTTATGCTCCCATGTCTGGCGTTGGGGATCTTTTGTACGACAAAGATGCTGTGTACATAAATATTAATGACCATTTTGTTCAATTTTCAAAAGTTGATGATGAAAACACTGCTACGACAAGCAGAGGAAACGGAAGAGATGTAGGAGAGGTTTTGGTGAGATCACTTCAGAATACCAAATACTCAATCAATGAAAAGCTAGAGAATAGCTATATAAATCTTTTTAGCCAAAATCCAAACGTGTCCCCAGAAGCTCTATGTGATGCACCTGTAGCTGATATGGTTGGTGAAGATAATAATGGAGTGGATTCAGATGGTTCAGAATCATCTGATCAGGATGAAGCTGATGAAGCTAATGGTTCTGTTGATGATGACGATGCAACAGATAGTACTACAAATAGAGGGCACTTAAATGAACAGATCGAGTTTCACAATGGAAGACAAAGAAGAAAAGTATTCTTTGGAAATGATGTTGGTCAAAGTGATCTGGTGGATTCAGAAGAAGATGATGAAGAAGATGAAGAGGATGGGGCTGCCAACGATAATGAGGAATCTTCCAATTCAGAATCTTCTGAAGAGGACGAAGCTGACAGTGATGATGAAACACATGAAGATGATGACATGGGAAATGTGTCGAAGTGGAAGGAGTCATTGTCAGAAAGAACTCTCGCCTTAAAACCTCCTAGTTTGATGCAACTCGTGTATGGGGAATCTACTAATAATTTGACTTCTATGAATGAGGAGATTGATAGTAGCGATGATGAAGATGGTGACTTTTTTAAGCCTATAGAAGAAGTGAAAAAGCAAAATATGAGAGATGGGCCAGATGATAGTATGGTCGATGCTGAGGATTGTTCCAAGTGTGCCAAACTTATTAGCCGGAAATGGGATAAGGAAGCTGAAGAGGAGATTCACAACCGTTTTGTGTCTGGGAATTTGGCAAAAACTGCACGCAAAAATGAACTGCAAAAAGCTAATACTGAAGAGGATGATGAAGATGTCTATGGTGACTTTGAAGATTTAGAAACAGGAGAAAACAGTGAGATTTATCAGACAGATGCAGTAGCAACAACACATAAGGGAGTTGATTTAGAAGCTAAGCAGCGGAGGCTTAAGAAACTTGCGCTTCGTGCAAACTTTGATGCTCAATATAATCGTGACCCTGAGACACCAGAGGATGATGCTGTCAATGAAAATGAAGCCGAGATCCATCGTGATCAACCCACTGAAAGTAACTATTTTGACAAGTTAAAGGAGGAGATTGAGCTTCGAAAGCAAATGAATATTGCTGAACTTGAGGATCTTGACGAGGATACCAGAGTAGAGGTAGAAGGCTTCCGAACAGGGACATACCTAAGATTGGAGGTTAATAATGTTCCATATGAAATGGTTAAACACTTTGATCCCTACCATCCAATATTGGTTGGAGGGGTTGGTTTAGGAGAGGAAAGTGTTGGATACATGCAGGCCAGGTTAAAGCGGCATAGGTGGCACAAGAAAGTCCTGAAAACTAGAGACCCTATTATTGTTTCTGTTGGATGGAGGCGTTACCAGACAACGCCAGTTTATGCTATTGAGGATCTCAATGGAAGACATAGAATGCTAAAATACACTCCAGAACACATGCATTGTCTTGCTATGTTTTGGGGCCCTCTCGCACCTCCCAACACTGGAATAGTTGCTGTTCAGACTTTATCAAACAAGCAGGCAGCTTTTAGGATTACCGCAACTGCAGTTGTTGTTGAGTTTAATCACGCTGCCAGGATAGTGAAGAAAATCAAAATGGTTGGTTATCCATGCAAGATATTCAAGAAAACAGCTCTTATCAAGGATATGTTCACTTCAAATCTTGAAGTAGCTCGGTTTGAAGGTGCGGCTATTCGAACTGTCAGCGGGATTAGGGGGCAGGTCAAGAAGGTAGCAAAACAAGAGATAGGTAACAAGCCAAAAAGTATGGGCGGCCAGATCAAAGAAGGAATTGCTAGGTGCACTTTTGAAGACAAAATTCTGATGAGTGACATTGTTTTCCTGCGAGCATGGACTCAAGTTGAAGTTCCTCAGTTTTATAATCCATTGACAACAGCATTGCAGCCTCGCGACCAGACATGGAAAGGAATGAGGACTGTTGCAGAATTGAGAAGAGAATGCAATCTCCCTATACCTGTAAAAAAAGATTCTCAATACGAGAAAATTGAAAGGAAGCCTAGAAAGTTCAATCCATTGGTGATTCCCAAGTCTCTTCAGGCAAATCTTCCCTTTGAATCAAAACCTAAGCAGACACCCAAGCAAAAAAGGCCGTTGCTTGAAGAGAGAAGGCAAAAGGGTGTTATCATTGATCCCCGCGAGAAAAAAATTCATGCTCTTGTTCAACACCTTCAGTTAGTGAAAGGCGAAAAGATGAAAAAGCGGAAGCTTAAGGAAGGGGAGAAGAGAAAAGCTGGTGAAGCATTGAAAGCTAAAGAGGAGGAATTGTCGAAAAAGCGGAGGAGAGAGGAAAGACGAGAGAAATACCGAAAAGATGACAAGCTCAATAAGAAAATTCGGAGAGCATAG 3552 0.4155 MAVNDADQSHKAHRTRQAGPKKKNKSKKKHDADDGQIMQNPKAFGFSSSKKVKRLQSRAVEKEQRRLHVPIIDRTYGEAPPFVIVVHGPPQVGKSLLIKSLIKHYTKHNLPDVRGPITIVSGKQRRLQFVECPNDINGMLDAAKFADLALLLIDGSYGFEMETFEFLNIMQVHGFPKVMGVLTHLDGFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLINGKYVKREVHNLARFISVMKFHPLSWRTTHPYVLVDRFEDITPPEQVHANIRCDRKVTLYGYLRGCNMKKGNKVHIAGVGDYGLAHVTGLPDPCPLPSAAKKKGLRDKEKLFYAPMSGVGDLLYDKDAVYININDHFVQFSKVDDENTATTSRGNGRDVGEVLVRSLQNTKYSINEKLENSYINLFSQNPNVSPEALCDAPVADMVGEDNNGVDSDGSESSDQDEADEANGSVDDDDATDSTTNRGHLNEQIEFHNGRQRRKVFFGNDVGQSDLVDSEEDDEEDEEDGAANDNEESSNSESSEEDEADSDDETHEDDDMGNVSKWKESLSERTLALKPPSLMQLVYGESTNNLTSMNEEIDSSDDEDGDFFKPIEEVKKQNMRDGPDDSMVDAEDCSKCAKLISRKWDKEAEEEIHNRFVSGNLAKTARKNELQKANTEEDDEDVYGDFEDLETGENSEIYQTDAVATTHKGVDLEAKQRRLKKLALRANFDAQYNRDPETPEDDAVNENEAEIHRDQPTESNYFDKLKEEIELRKQMNIAELEDLDEDTRVEVEGFRTGTYLRLEVNNVPYEMVKHFDPYHPILVGGVGLGEESVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQTLSNKQAAFRITATAVVVEFNHAARIVKKIKMVGYPCKIFKKTALIKDMFTSNLEVARFEGAAIRTVSGIRGQVKKVAKQEIGNKPKSMGGQIKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDQTWKGMRTVAELRRECNLPIPVKKDSQYEKIERKPRKFNPLVIPKSLQANLPFESKPKQTPKQKRPLLEERRQKGVIIDPREKKIHALVQHLQLVKGEKMKKRKLKEGEKRKAGEALKAKEEELSKKRRREERREKYRKDDKLNKKIRRA* 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4772 1183 MobiDBLite consensus disorder prediction 1091 1108 - -
Psa7g4772 1183 MobiDBLite consensus disorder prediction 440 457 - -
Psa7g4772 1183 PANTHER BNAC08G44910D PROTEIN 1 1175 - -
Psa7g4772 1183 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 79 244 IPR030387 -
Psa7g4772 1183 SMART aarp2cn2 230 316 IPR012948 GO:0005634|GO:0042254
Psa7g4772 1183 MobiDBLite consensus disorder prediction 1082 1108 - -
Psa7g4772 1183 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 696 1017 IPR007034 -
Psa7g4772 1183 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 221 IPR027417 -
Psa7g4772 1183 SMART DUF663_2 687 1016 IPR007034 -
Psa7g4772 1183 Coils Coil 751 771 - -
Psa7g4772 1183 Pfam AARP2CN (NUC121) domain 230 315 IPR012948 GO:0005634|GO:0042254
Psa7g4772 1183 MobiDBLite consensus disorder prediction 1131 1183 - -
Psa7g4772 1183 Coils Coil 1143 1167 - -
Psa7g4772 1183 MobiDBLite consensus disorder prediction 434 557 - -
Psa7g4772 1183 MobiDBLite consensus disorder prediction 1133 1175 - -
Psa7g4772 1183 Gene3D - 82 244 IPR027417 -
Psa7g4772 1183 PANTHER RIBOSOME BIOGENESIS PROTEIN 1 1175 IPR039761 GO:0042254
Psa7g4772 1183 MobiDBLite consensus disorder prediction 495 538 - -
Psa7g4772 1183 CDD BMS1 43 272 IPR037875 GO:0005525
Psa7g4772 1183 MobiDBLite consensus disorder prediction 1 49 - -
Psa7g4772 1183 MobiDBLite consensus disorder prediction 716 743 - -
Psa7g4772 1183 MobiDBLite consensus disorder prediction 719 743 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4772 K14569 - gmx:100792176 1691.4