Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4737 ATGGTGGATGTGTACACTGTGAAGGTGGAAGAAGCAAGATCTGCAACTCATGAAAAGCCATCAGCAGGTCCTGTCTACAGATGCATCTATGCTAAAGATGGTTTGTTGGAGTTGCCTTCTCATTTTCAATCTCCATGGGACTTTTTCAGGGAGTCTGCTGCAAGGTGCCCCAGCAAACCTATGCTGGGTCAGCGTCAAAAAACTGATTCAAAGGTTGGTCCCTATGAATGGGTCACATTTGAGGAGGCTTATGATGCTGCTATCCGAATTGGTTCCGCCATGAAGAGCCGCGGTGTCAATCCGGGTTATCGTTGTGGCCTATATGGATCCAATTGTCCTGAGTGGATAATTGCAATGGAGGCTTGTAACAGCTATGCAGTAACATATGTGCCATTATATGACACTCTTGGTCCTAATGCTGTGGAGTTTATCATTAACCATGCTGAAGTTTCGATAGCATTTGTACAGCAAAGCAAGATTCCTTCTGTTTTGTCATGTCTTGATCGGTGTACAAGTCTTAAGACTATTGTGAGTTTTGGTAATGTTTCAATCGAACAAAAGAAAGAAGCCGAGGAACTTGGTGTATCGTGCTTCACGTGGGGAGAGTTTCTTCAGTCGGGAAATCGGGATTTGGATCTACCGTTAAAAAATAAGACTAACATCTGCACAATCATGTACACAAGTGGAACAACAGGTGAACCGAAAGGTGTCATTATTAAGAACGAGGCTTTCATGACTCAAGTGTTGTCCATTGACCAACTTCTTTCGTTAACAGACAAAGGCGCAGCTGAAGACGATGTGTACTTCTCTTTTCTTCCTCTTGCTCATGTATATGACCAGATAATGGTGACCTATTGCATCCACAAGGGCTCGTCAATAGGATTTTGGCAAGGCGATATCAGATTTTTAATGGAAGATATTCAGACACTGAAACCAACTATATTTTGTGGCGTTCCTCGAGTTTATGACCGTGTTTACGCTGGTATCAATAGCAAAATTTCATCGGAAGGATCACTGAAAAAGACACTGTTTCAGTATGCATATAACTACAAATTGGGATATCTAAATAGTGGTCTTCCACAAGACAAAGCAGCACCTTGGTTTGATAGGCTTGTGTTCGACAAGATTAAACAAGCATTGGGTGGACGAGTTCGAATCCTGTTATCAGGAGCCGCGCCTTTGTCGAAGCACGTTGAAGAGTTTCTGAGGGTCACTTTTGGATCTACCTTGGCACAAGGATATGGTCTCACTGAAAGCTGCGCGGGGTGTTTCACTTCAATATCCAATGTGTTTTCTATGGTGGGAACGGTCGGAGTTCCAATGCCAACGATTGAAGCCAGGCTTGAGTCCGTGCCTGAGATGGGATATGACGCACTTTCCAGTCAACCCCGTGGAGAAATTTGCTTGAGAGGGAATACCTTGTTCGCCGGTTACCACAAACGTCAAGATCTTACCGAAGAGGTTATCGTTGACGGTTGGTTTCATACAGGTGACATTGGAGAATGGCTTCCAAATGGATCCATGAAAATTATTGACAGAAAAAAGAACATCTTCAAATTGTCTCAAGGAGAATACGTTGCTGTCGAGAATATCGAAAACAAGTATTTGCAGTGTCCTCTTATAACTTCGGTTTGGGTCTACGGAAATAGTTTCGAATCTTTCTTGGTGGCTGTTGTGGTTCCGGAAAGACAAGCCCTTGAGAATTGGGCAGTGAAGCATGATTTGTCTGATGATTTTAAATCATTATGCGGAAATCTAAAGGCACGAAAATTCATCTTGGATGAACTCAACAGCATTGGTCAGAAACATCAATTTCGAGGTTTTGAGCTGATAAAAGCCGTTTTTCTGGAACCGGTTCCCTTTGATGTGGAAAGAGATCTGGTAACTCCGACATTCAAGTTGAAGAGGCCGCAATTACTAAAGCACTATAAGGATTGTATTGATCAGCTATACAAGGAAGCAAAGGGAGCTATGGTGTGA 1980 0.4293 MVDVYTVKVEEARSATHEKPSAGPVYRCIYAKDGLLELPSHFQSPWDFFRESAARCPSKPMLGQRQKTDSKVGPYEWVTFEEAYDAAIRIGSAMKSRGVNPGYRCGLYGSNCPEWIIAMEACNSYAVTYVPLYDTLGPNAVEFIINHAEVSIAFVQQSKIPSVLSCLDRCTSLKTIVSFGNVSIEQKKEAEELGVSCFTWGEFLQSGNRDLDLPLKNKTNICTIMYTSGTTGEPKGVIIKNEAFMTQVLSIDQLLSLTDKGAAEDDVYFSFLPLAHVYDQIMVTYCIHKGSSIGFWQGDIRFLMEDIQTLKPTIFCGVPRVYDRVYAGINSKISSEGSLKKTLFQYAYNYKLGYLNSGLPQDKAAPWFDRLVFDKIKQALGGRVRILLSGAAPLSKHVEEFLRVTFGSTLAQGYGLTESCAGCFTSISNVFSMVGTVGVPMPTIEARLESVPEMGYDALSSQPRGEICLRGNTLFAGYHKRQDLTEEVIVDGWFHTGDIGEWLPNGSMKIIDRKKNIFKLSQGEYVAVENIENKYLQCPLITSVWVYGNSFESFLVAVVVPERQALENWAVKHDLSDDFKSLCGNLKARKFILDELNSIGQKHQFRGFELIKAVFLEPVPFDVERDLVTPTFKLKRPQLLKHYKDCIDQLYKEAKGAMV* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4737 659 ProSitePatterns Putative AMP-binding domain signature. 224 235 IPR020845 -
Psa7g4737 659 Gene3D - 33 513 IPR042099 -
Psa7g4737 659 Pfam AMP-binding enzyme 49 521 IPR000873 -
Psa7g4737 659 CDD LC-FACS_euk 73 652 IPR045311 GO:0004467|GO:0006631
Psa7g4737 659 Pfam AMP-binding enzyme C-terminal domain 531 577 IPR025110 -
Psa7g4737 659 PANTHER LONG-CHAIN FATTY ACYL COA LIGASE 2 655 - -
Psa7g4737 659 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 655 - -
Psa7g4737 659 SUPERFAMILY Acetyl-CoA synthetase-like 38 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4737 Psa-Chr7 412229796 412235686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4737 5 652 Acyl Lipid Metabolism Gene Families AT4G23850 55.846 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4737 K01897 - gmx:100790068 1177.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4737 7 412229796 412235686 Psa7g4737 7 412229796 412235686 ECH