Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4615 ATGGGTTATTCCAAACAATGTTGCTCTCTCTTTTCATTGGTATTATTGTTAGTTGCATGTGTAAATGGAGAGGATCCTTATAGGTTTTACACTTGGAAAGTTACATATGGTGATATTTTTCCACTTGGAGTTAAACAACAGGGAATATTGATAAATGGACAATTTCCAGGGCCACAGATTGATTCAGTGACTAATGATAACTTGATTATCAATGTTTTCAATAACTTGGATGAACCTTTCCTCATCTCTTGGAATGGTGCACTGCAGAGGAGAAACTCATGGCAAGATGGAGTGTATGGTACAAATTGTCCAATCCCTCCAGGGAAGAATTACACTTATGTTCTTCAAGTAAAAGATCAAATTGGTAGCTATTTCTACTTTCCTTCCCTTGGATTACACAAAGCAGCAGGCGGTTACGGCGGTTTCAAAATCGTTAGCCGCCCTTTGATACCGGTGCCTTTTGATCCTCCGTCTGGAGATATCACCATATTAGCAGGAGATTGGTACAAGAGCAGTCATAGAGATTTGAGGGCAATTTTAGACAGTGGAAAGAGTCTTCCTTACCCTGACGGACTTATCATCAATGGTGGTAATTCCGCCGTGTTCACAGTCGATCAAGGGAAGACATACCGATTACGGATATCGAATGTGGGGATTAGCACTTCGATAAATTTTAGAATCCAAAACCATAAGCTGAAGCTTGTTGAGGTGGAAGGAACTCACACAATTCAAAACTATTATGATTCAATTGATATTCATTTGGGACAAACATATTCTGTATTGGTTACTGCTGATCAACCACCAAAAGATTACTACATTGTTGCCTCATCAAGGTTCACCTCAAAGGTCTTCACTGCTTCATCCATTCTTCATTACAGTAACTCGAAACAGAAAGCTAGCGGTCCTCTTCCGGCCGGACCTCCCCCTGATTTCGATTGGTCCCTCCAACAAGCTCGAACTATTAGGACGAATCTTACTGCAAGTGGGCCAAGACCAAATCCACAAGGAACATATCATTATGGATCGATAAACATAACAAGAACAATTAGGCTTAAAAATTCTGCTCCAACTATTAATGGAAAACTCAGATACGCTGTGAATAGTGTGTCGTTTGTTCCCGCGGATACACCGCTTAAACTAGCAGATTACTTCAATATTGAAGGGGTGTTTTCACTTGGAAGTATCCCGGACAAACCCACTGAGGGCCCCGGTCATCTTACGACTTCTGTCATGGCAGCCGATTTTCGAGGTTTTGCGGAAATCGTATTTGAAAATACCGAAAGTTATTTGCAATCATGGCACATTGATGGACACAGTTTCTTTGTAGTAGGAATGAATAAAGGACAATGGTCAGAAGCAAGCAGAGGAAGTTACAATCTAAACGACGCAGTTCATCGTTGTTCAGTTCAGGTGTTTCCAAAGACATGGACTGCAGTGTACATGCCATTGGACAATGTAGGAATGTGGAATGTGAGATCTCAGAATTGGGCAAGACAGTATTTAGGTCAACAATTTTATCTAAGAGTGTATTCTCCTGTAAGATCAACAAGAGATGAGAACCTAATTCCAAGTAATGCACTGAAATGTGGCAAGGCTGTGGGACATTAA 1608 0.4086 MGYSKQCCSLFSLVLLLVACVNGEDPYRFYTWKVTYGDIFPLGVKQQGILINGQFPGPQIDSVTNDNLIINVFNNLDEPFLISWNGALQRRNSWQDGVYGTNCPIPPGKNYTYVLQVKDQIGSYFYFPSLGLHKAAGGYGGFKIVSRPLIPVPFDPPSGDITILAGDWYKSSHRDLRAILDSGKSLPYPDGLIINGGNSAVFTVDQGKTYRLRISNVGISTSINFRIQNHKLKLVEVEGTHTIQNYYDSIDIHLGQTYSVLVTADQPPKDYYIVASSRFTSKVFTASSILHYSNSKQKASGPLPAGPPPDFDWSLQQARTIRTNLTASGPRPNPQGTYHYGSINITRTIRLKNSAPTINGKLRYAVNSVSFVPADTPLKLADYFNIEGVFSLGSIPDKPTEGPGHLTTSVMAADFRGFAEIVFENTESYLQSWHIDGHSFFVVGMNKGQWSEASRGSYNLNDAVHRCSVQVFPKTWTAVYMPLDNVGMWNVRSQNWARQYLGQQFYLRVYSPVRSTRDENLIPSNALKCGKAVGH* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4615 535 Pfam Multicopper oxidase 376 511 IPR011706 GO:0005507|GO:0016491
Psa7g4615 535 SUPERFAMILY Cupredoxins 156 332 IPR008972 -
Psa7g4615 535 Gene3D - 27 148 IPR008972 -
Psa7g4615 535 Pfam Multicopper oxidase 160 294 IPR001117 -
Psa7g4615 535 PANTHER MULTI-COPPER OXIDASE 8 531 IPR045087 -
Psa7g4615 535 SUPERFAMILY Cupredoxins 24 173 IPR008972 -
Psa7g4615 535 Pfam Multicopper oxidase 34 146 IPR011707 GO:0005507
Psa7g4615 535 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Psa7g4615 535 SUPERFAMILY Cupredoxins 343 529 IPR008972 -
Psa7g4615 535 PANTHER L-ASCORBATE OXIDASE HOMOLOG 8 531 - -
Psa7g4615 535 Gene3D - 341 533 IPR008972 -
Psa7g4615 535 CDD CuRO_1_AAO_like_1 29 144 IPR034273 GO:0005507
Psa7g4615 535 Gene3D - 158 331 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4615 Psa-Chr7 395269103 395272014 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4615 - - rcu:8285883 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4615 7 395269103 395272014 Psa7g4615 7 395269103 395272014 ECH