Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4510 ATGCTTGGCTGTATACCGAGATGCTTGCAGCTGAAACAATTGTTCATCAAAAGGATAATCTCATTCTTGGCATACTCTCCGGAACAACATCCCATTGTGCTTCAAATTGGAGGGAGCAATGTAGAAAGCTGTGGTTGCCCAAGTCCAAGAGTAGCTGGACATGGGAGTTTTGGTGTGCGTCTTATGCTTGATCCAAAGTTTGTTGCTGAGGCTATGTCAGCAATTGCTTCAAGTACAAATGTACCTGTCACTGTCAAATGTCGAATTGGCGTGGACGATCATGATTCTTACGATGAACTGTGTGATTTCATATTCAATGTTTCTTCTTTATCACCCACTAAGCATTTCATAATTCACTCAAGGAAGGCACTGCTCAATGGCATTAGCCCGGCTGAAAATAGGAGTATTCCTCCGCTAAAATACGAATACTTTTATGGCCTCTTACGAGACTTTCCAGATTTAACATTCACAATAAATGGGGGTATTGCTAGTGTTGATGAGGTCATTGCAGCTCGAGAAGCTGGGGCTCATGGCGTTATGATTGGACGTGCAGCATTCTATAACCCTTGGAATATATTGGGACATGTTGATACTGCAATTTACGGTGCACCAAGCTGTGGTCTTACACGTCGTCAGGTTCTTGAAAAATATATAGTCTATGGGGACTCAGTGTTGGGAAAATATGGACATAAGCCAACTGTACGAGACATCGTAAAGCCTTTACTCAATCTTTTCCATTCAGCACCTGGGAATGGACAGTGGAAGCGCAACGCAGATGCTGCTTTTCGAAATTGCATGACAATACAATCATTTTTTGAAGAGACCCTTGAAGCAATTCCTGACTCTGTATTGGATTCGCCTGTTTCAGAACCATCTCCTGGCCGCACCGATCTTTTTGCTAATGTAGACAGTTTACTGCCTCCTCCATACAAAACAAGAGAAGAGGCCATTGTTATATGCGCATAG 966 0.4286 MLGCIPRCLQLKQLFIKRIISFLAYSPEQHPIVLQIGGSNVESCGCPSPRVAGHGSFGVRLMLDPKFVAEAMSAIASSTNVPVTVKCRIGVDDHDSYDELCDFIFNVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGIASVDEVIAAREAGAHGVMIGRAAFYNPWNILGHVDTAIYGAPSCGLTRRQVLEKYIVYGDSVLGKYGHKPTVRDIVKPLLNLFHSAPGNGQWKRNADAAFRNCMTIQSFFEETLEAIPDSVLDSPVSEPSPGRTDLFANVDSLLPPPYKTREEAIVICA* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4510 321 Gene3D Aldolase class I 8 196 IPR013785 -
Psa7g4510 321 Gene3D - 207 271 - -
Psa7g4510 321 SUPERFAMILY FMN-linked oxidoreductases 22 257 - -
Psa7g4510 321 CDD DUS_like_FMN 17 190 IPR035587 -
Psa7g4510 321 Pfam Dihydrouridine synthase (Dus) 44 264 IPR035587 -
Psa7g4510 321 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 43 318 IPR004653 GO:0002943|GO:0017150
Psa7g4510 321 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 21 42 IPR004653 GO:0002943|GO:0017150
Psa7g4510 321 PANTHER TRNA-DIHYDROURIDINE SYNTHASE 43 318 - -
Psa7g4510 321 PANTHER TRNA-DIHYDROURIDINE SYNTHASE 21 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4510 Psa-Chr7 373572962 373577671 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4510 K05539 - gmx:100779457 520.776