Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4461 ATGGCTCTCCTCACTTTCCCTCATTTTCCTTCCAATTTCCACTCACTTTCCCGCTCCCCAAACAACCGCTTCTCTCCATCTCCCCGCCGTTACTCCACCACAACCGCAACATCTTCCAGCACCGCCATTCTCTGGTTCAAGCACGATCTCCGAACAGACGATCACCCTGGACTACTCGCTGCCTCCGAATTTCGATCACTAGTTCCTATTTACATCTTCGATCACCGCATTCTTTCTCGTTTTTCCGATGAAATGCTTGAACTAGTTCTGTCTGCGTTGAAGGATTTGAGGAAGTCTTTGCAGGAACGTGGTTCCGATCTCATGATTAGGTTTGGCAATGCTGAGAACGTGATACAACAACTCGCAATCGAGGTCAAAGCCACTTGTGTATTTGCGGAACAAGAAGTGGAGCATGAACTGCTCTTCGTCATGGATGTTGTCAACAAACATTTGAAATCAATGAAGGTTCCACAAGACATTCCAAGAATTGAATTGTGGAAGACTCCATTTTATGATGTAAAGGTGCAAACTCTTGCCTCATCATATGATGACTTTGAGAAACTTCGGCTCCAAGTGACTACACCACTTCAGCTTTCAACATTACCTGGTGCAGAGATGGAGTTAGATTGGGGCAATCTTCCCGGGTATGATGATATTAAGGGGTTTATGGCTAACAACCGGAGGAAATCACAAGATGATTGGAATATGATCAAGGAGACATCAGCTGAAACCCTGTTAGGCAGAGAAATGTTGAAGTCCCGTGAGAGTGGGGAGAGAAGTTATGGCTTTAGACAGATCAAGTCAGAGGAATCAAATAAATCTGTGTTTGTTACACAAAAAGGAAATGTTGTTGGAGGTGGAACATATAGTGTACTAAATGCATTGTCTGCATATTTGAGGTATTTGGAAGGAATGGCTCGTGATGATTGGCAAGAGGTACATGACAAACTGCGTGCTTCAGAAAATCGAAATGGAGCATCATTTAACGCACTATTTGGTTCGGCCTTATCTCTGGGCATTATATCCAGAAGAAGAGTACACTATGAAGCTATCAAATATGAGAAAGAACGAAAGGCAGGATTCTTATCTCCTTTTGGATATTCAGCTGCTACTATTGCTGCAGCAGTTGAGGCCGTGTGTTCAAAGGAGTGGTATTGGATTTTAGCTTTGAGAAATCAGATAAACAATGATGGAAAACAGTCAACACGGATATGGAGATGGAATGGTTTTCTTATTCAGTATACAGTTGCTGGTGAAGATGGTCCTGCTGTTCTTCTTGTGCATGGTTTTGGTGCCTTTGGAGAGCATTACCGTGACAACATATACGGTTTATCTAGTACCGGACATCGAGTTTGGGCTATTACATTGTTAGGATTTGGCAAATCCGAAAAGCCAAATATTGTATATACTGAACTCTTGTGGGCTGATCTATTGAGAGATTTTATTGTCGATGTTGTGGGGGAACCCGTCCACCTTGTTGGCAACTCAATTGGTGGTTATATTGTTGCTATTGTTGCTCGAGTTTGGAATGTTTTGATCAAATCCATTGTCTTGATCAACAGTGCTGGCAATGTTATCCCAAGAAATACATCCATGTCATTGTCTAGGCAAAGTGATAGAAAAACATCAGTGGCTACATGGTTGGGTTCTCGCATTATTCTGTTTTACTTGAGGCTAAGAATTCAAGAACTTGTTAAGCAATGTTATCCAACTAAGATTGAAAGAGCAGATGATTGGCTCATAAATGAAATGCTAAGAGCATCCTATGATCCTGGTGTGCCTGTGGTCCTAGAAAGCATCTTTAGCTTTAATCTGTCCATACCTCTTAACTATCTTCTTGAAGATGTCAAGGAAAATGTTATAATTATACAGGGAATGAAAGATCCAATTTCTGACTCTAATGCGACGGTGGCTATGCTTAAAGAGCATTGTGATGGTGTTATAATCAAGAAGATAGATGCTGGCCATTGTCCACACGATGAGGTGCCAGAACTAGTTAATTCTATCATTTGTGATTGGATACATAGGGTGGAAAGTAACATTTTAGCAGGGTTCTCAGAGTAA 2064 0.4157 MALLTFPHFPSNFHSLSRSPNNRFSPSPRRYSTTTATSSSTAILWFKHDLRTDDHPGLLAASEFRSLVPIYIFDHRILSRFSDEMLELVLSALKDLRKSLQERGSDLMIRFGNAENVIQQLAIEVKATCVFAEQEVEHELLFVMDVVNKHLKSMKVPQDIPRIELWKTPFYDVKVQTLASSYDDFEKLRLQVTTPLQLSTLPGAEMELDWGNLPGYDDIKGFMANNRRKSQDDWNMIKETSAETLLGREMLKSRESGERSYGFRQIKSEESNKSVFVTQKGNVVGGGTYSVLNALSAYLRYLEGMARDDWQEVHDKLRASENRNGASFNALFGSALSLGIISRRRVHYEAIKYEKERKAGFLSPFGYSAATIAAAVEAVCSKEWYWILALRNQINNDGKQSTRIWRWNGFLIQYTVAGEDGPAVLLVHGFGAFGEHYRDNIYGLSSTGHRVWAITLLGFGKSEKPNIVYTELLWADLLRDFIVDVVGEPVHLVGNSIGGYIVAIVARVWNVLIKSIVLINSAGNVIPRNTSMSLSRQSDRKTSVATWLGSRIILFYLRLRIQELVKQCYPTKIERADDWLINEMLRASYDPGVPVVLESIFSFNLSIPLNYLLEDVKENVIIIQGMKDPISDSNATVAMLKEHCDGVIIKKIDAGHCPHDEVPELVNSIICDWIHRVESNILAGFSE* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4461 687 Gene3D alpha/beta hydrolase 399 674 IPR029058 -
Psa7g4461 687 Gene3D HUPs 23 188 IPR014729 -
Psa7g4461 687 PANTHER DNA PHOTOLYASE 29 681 - -
Psa7g4461 687 SUPERFAMILY alpha/beta-Hydrolases 401 677 IPR029058 -
Psa7g4461 687 Pfam Alpha/beta hydrolase family 424 667 IPR000073 -
Psa7g4461 687 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 41 202 IPR036155 -
Psa7g4461 687 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 40 173 IPR006050 -
Psa7g4461 687 Pfam DNA photolyase 43 156 IPR006050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4461 Psa-Chr7 368486846 368492097 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4461 408 501 Acyl Lipid Metabolism Gene Families AT3G05600 36.000 3.17e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4461 - - gmx:100813721 1033.09