Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4445 ATGAGAGAAAACAAAATGACAATATTGTCAAAACTTGCATTGCTAATAACAATGATAATGTCTACTACAATTGTAAAATCAGCTCCAGGTAACTATGCTGATGCATTAACAAAAAGTATTTTGTTTTTCGAAGGCCAAAGGTCAGGATATTTGCCAGCTTCTCAACGTATGACATGGAGAAAAAACTCTGCACTCAATGATGGATCTGATATTCGTGTGCGTATGGATGGTGGATACTATGATGCTGGTGACAACGTAAAGTTCCATTTCCCAATGGCATTTACAACCACCATGCTAGCTTGGAGTGTCATAGAATTTGGAGATCTCATGGGTCCCGATTTACAACATGCAATCGAAGCAATTCGTTGGGGAACCGATTATTTTCTAAAAGCAACCAACGATCCAAACGTTGTTATAGCACAAATAGGAGATCCCAATAGCGACCACGGTTGTTGGGAAAGACCAGAAGACATGGACACTTCCAGGAAAACATATGTTGTCACTACGAGTAAGCCCGGTTCCGAGGTTTCTGCCGAAATCGCGGCTGCTCTCGCTGCATCATCCATTGCATTAAGCAAAAATGACAGTAGATACTCTCAAACTCTTGTTAGCAGAGCTAAACAGGTATTTGATTTTGCGAATAATCATCGTGGAAGTTATAATGATTCCATAGGTAATGGAGCATGCCCCTTCTACTGTGATTTCAATGGTTACATGGACGAGCTAGTTTGGGGTGCTGCATGGTTATATAAGGCTTCTAATGATCAAATTTATTGGAATTTTGTGAAATCAAATATACAATCCTTAGGACCCTTAACTGAGTTTGGATGGGATTCAAAGCATGCTGGAATTAATGTACTAATTTCTCAGCGCGTGATGAACGATCCACCAAACCAAAATCCATTCATTCCCAATGCAGACAATCTTATATGCTCATTGTTGCCTGACTCACCAACCAAAGCAGTTACATATTCTAAAGGTGGACTTTTATTCAAATCTGGAGCCAGTAATTTGCAACATGTAACATCATATTCTTTTCTGTTAATTGTATATGCACGTTACATGCACGTTAACCATAAAACAGTCAATTGTGGTAGTGTTGTTGCCAAACCAGCTTACCTCATTGATCTTGCAAAATCTCAGGTGGATTATGTACTAGGAAAGAACCCGTTAGGAATGTCATACATGGTAGGATATGGACAAAAATTTCCTCAGAAGATACATCATCGAGCTTCAACGATGCCATCAATAGATGTGTATCCTAAACATATAGGGTGTCGTGATGGAGACAAATATTTTGATTTGAAATCACCAAATATCAATCAACTAACTGGTGCGATTGTTGGAGGGCCATCAGAGGATGATTCTTTTCAAGATTCACGCTTCAATGTTTCTCAATCTGAGCCAGCTACATATATTAATGCTCCTTTTGTTGGAGTTTTGGCTTACTTCAAACAACGTAATCCGTGA 1470 0.3905 MRENKMTILSKLALLITMIMSTTIVKSAPGNYADALTKSILFFEGQRSGYLPASQRMTWRKNSALNDGSDIRVRMDGGYYDAGDNVKFHFPMAFTTTMLAWSVIEFGDLMGPDLQHAIEAIRWGTDYFLKATNDPNVVIAQIGDPNSDHGCWERPEDMDTSRKTYVVTTSKPGSEVSAEIAAALAASSIALSKNDSRYSQTLVSRAKQVFDFANNHRGSYNDSIGNGACPFYCDFNGYMDELVWGAAWLYKASNDQIYWNFVKSNIQSLGPLTEFGWDSKHAGINVLISQRVMNDPPNQNPFIPNADNLICSLLPDSPTKAVTYSKGGLLFKSGASNLQHVTSYSFLLIVYARYMHVNHKTVNCGSVVAKPAYLIDLAKSQVDYVLGKNPLGMSYMVGYGQKFPQKIHHRASTMPSIDVYPKHIGCRDGDKYFDLKSPNINQLTGAIVGGPSEDDSFQDSRFNVSQSEPATYINAPFVGVLAYFKQRNP* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4445 489 Gene3D - 27 489 IPR012341 GO:0005975
Psa7g4445 489 PANTHER ENDOGLUCANASE 11 487 - -
Psa7g4445 489 SUPERFAMILY Six-hairpin glycosidases 29 484 IPR008928 GO:0005975
Psa7g4445 489 PANTHER ENDO-1,4-BETA-GLUCANASE 11 487 - -
Psa7g4445 489 Pfam Glycosyl hydrolase family 9 32 481 IPR001701 GO:0004553|GO:0005975
Psa7g4445 489 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 384 410 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4445 Psa-Chr7 365411814 365414925 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4445 14 484 Glycoside Hydrolase AT1G70710 56.842 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4445 K01179 - gmx:100814370 695.656