Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4413 ATGGCCGGTAAAAGTGGAACTCCGGCGACCTACTCACCGTCTCCGACAACCGGTAAAAAGAAATCAACACTTTTCAAGGAAGATTGGATCCGACCCGATGGCCGTGGTTTCCACCAGTGTAGACCCGCATTTTTCAGGACTGGTGCTGTGAATGCTGCATCAGGATCTGCATATGCCGAGTTTGGAAACACCAAAGTCATTGTTTCTGTATTTGGGCCAAGAGAGAGCAAGAAAGCAATGTTGTATAGTGATTCGGGGCGTCTGAATTGCAATGTCAGCTATACGACGTTTTCAACTCCAGTTCGTGGACAGGGTTCAGACCACAAAGAATACAGTTCCATGCTTCATAAAGCTTTGGAGGGTGCCATAATATTGGAAAGTTTCCCCAAGACCACTGTGGATGTTTTTGCATTGGTGCTGGAATCTAGTGGCAGTGATCTTCCAGTTGTCATATCAGTTGCTAGTCTTGCCTTGGCAGATGCTGGAATTCTGATGTATGACCTTGTGGCCTCAGTTTCTGTGTCATGTATCGGTAAGAGCCTTGTCATTGATCCTATTTCGGAGGAGGAAAACTGCCAAGACGGAAGCTTATTGATTACTTGCATGCCTTCTCGCTATGAAATCACCCAACTGACAGTTACTGGGGAATGGTCCACCCCAAAGATTAACGAGGGGATGCAGCTGTGCTTGGATGCTTGTGCAAAGCTTGCAAAGATTATGAGGTCATGTTTGAAAGAATCCGCGTCTGATGCACAGGATGAAAGCTCTTAA 771 0.463 MAGKSGTPATYSPSPTTGKKKSTLFKEDWIRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDSGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLHKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVASVSVSCIGKSLVIDPISEEENCQDGSLLITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAKLAKIMRSCLKESASDAQDESS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4413 256 CDD RNase_PH_MTR3 40 246 - -
Psa7g4413 256 Pfam 3' exoribonuclease family, domain 1 39 163 IPR001247 -
Psa7g4413 256 PANTHER EXOSOME COMPLEX COMPONENT 7 248 - -
Psa7g4413 256 PANTHER EXOSOME COMPLEX COMPONENT MTR3 7 248 - -
Psa7g4413 256 Pfam 3' exoribonuclease family, domain 2 167 227 IPR015847 -
Psa7g4413 256 Gene3D - 18 255 IPR027408 -
Psa7g4413 256 SUPERFAMILY Ribonuclease PH domain 2-like 165 250 IPR036345 -
Psa7g4413 256 MobiDBLite consensus disorder prediction 1 22 - -
Psa7g4413 256 SUPERFAMILY Ribosomal protein S5 domain 2-like 26 194 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4413 Psa-Chr7 362540042 362545431 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4413 K12587 - gmx:100816271 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4413 7 362540042 362545431 Psa7g4413 7 362540042 362545431 ECH