Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4276 ATGGCAACCGTTCCTTTGGCCTCAGCTGTTCTAAGAAGGCTTGAGGGTAAGGTGGCTCTGATCACCGGTGGTGCTGGCGGCATTGGCGAAGCCACCGCAAGACTCTTCTCCAACCATGGAGCTAAAGTCGTAATAGCTGACCTCCAAGACGACAAAGGTCACTCAATTTGCCAGGAGTTACACAAATCATCTGCCTCTTATGTTCACTGTGACGCGACAAAGGAAGAAGACATAGAAACCGCCGTGAACACGGCGGTTTCCACTTACGGTAAACTGGACATCATGATAAACAACGCTGGCATATCCGGTGCGAATAAAACCAACATACTTGAAAACACGTTATCTGAATTTCAACAAGTGGTTAACGTGAACTTGGTTGGTGTCTTTCTTGGAACAAAACATGCTGCAAGAGTAATGATCCCTGCTCGACGAGGTAGCATAATTAACACAGCTAGTATTGCTGGAAACATAGGTGGTACGATGAATCATGCTTACACAAGTTCAAAGCACGCCGTTGTGGGGCTGACGAGAAACACGGCGGTCGAGCTTGGACCGTTCGGTATTCGGGTGAATTGTGTGTCGCCATATATTGTTCTCACGCCGATGTCTAAGAAATACTTGGAGCTAGATGATGATGGGATTCTAGGGTTTTATTCTAACCTAAAGGGTACTAATCTTTTGCCAAAGGATGTGGCTGAAGCTAATCTGTACTTGGGAAGTGATGAATCTAAGTATGTAAGTGGTCACGATCTCGCTGTTGATGGAGGATGTTCGGTTGTGAACAATGGATTTTGTGTCTTTGGACGATCTGTCTGA 816 0.4596 MATVPLASAVLRRLEGKVALITGGAGGIGEATARLFSNHGAKVVIADLQDDKGHSICQELHKSSASYVHCDATKEEDIETAVNTAVSTYGKLDIMINNAGISGANKTNILENTLSEFQQVVNVNLVGVFLGTKHAARVMIPARRGSIINTASIAGNIGGTMNHAYTSSKHAVVGLTRNTAVELGPFGIRVNCVSPYIVLTPMSKKYLELDDDGILGFYSNLKGTNLLPKDVAEANLYLGSDESKYVSGHDLAVDGGCSVVNNGFCVFGRSV* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4276 271 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 8 264 - -
Psa7g4276 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 259 IPR036291 -
Psa7g4276 271 Pfam Enoyl-(Acyl carrier protein) reductase 23 257 - -
Psa7g4276 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 IPR002347 -
Psa7g4276 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 IPR002347 -
Psa7g4276 271 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 IPR002347 -
Psa7g4276 271 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 152 180 IPR020904 GO:0016491
Psa7g4276 271 PANTHER MOMILACTONE A SYNTHASE 8 264 - -
Psa7g4276 271 Gene3D - 7 267 - -
Psa7g4276 271 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Psa7g4276 271 PRINTS Glucose/ribitol dehydrogenase family signature 90 101 IPR002347 -
Psa7g4276 271 PRINTS Glucose/ribitol dehydrogenase family signature 139 155 IPR002347 -
Psa7g4276 271 PRINTS Glucose/ribitol dehydrogenase family signature 165 184 IPR002347 -
Psa7g4276 271 PRINTS Glucose/ribitol dehydrogenase family signature 186 203 IPR002347 -
Psa7g4276 271 PRINTS Glucose/ribitol dehydrogenase family signature 221 241 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4276 Psa-Chr7 347256353 347258063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4276 14 259 Acyl Lipid Metabolism Gene Families AT1G63380 33.462 2.14e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4276 - - gmx:100782627 393.275