Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4269 ATGAAAGTAAATAAGGGGAAAAGAGATATACGAACTGGGGAAAAGAAGAAAAAAAGAAACTTGGAACAAAACGTTAAGGATGTTGAGACATATGTTACAGTGAACAATGATGATCATGGGCTGAAGGTTATGAAGAGAAAAAAGGTGAAAGTTTCGGCTGGTAGAAAAAAGAACAAGGACATAAATGTCGTTGCGACACAAAGACCAGAAGATGATGAAGTTGATTTAGAAGAGCAAAGTGTGGTTCATGAAGTGCAGGCTATAAAGGGAGAAAAGGAGAAAGTTACTACTACCAGTCGAAAAAGGAAAAACAAAGACAGAAACCTAGTTGGAAGACAAAGACGGGAGGATGTAGAAGTGGATTTAGAAAAGGAAAATGATGGAGTAATGGAACATTGTGATGCTAAACAAGAGGAAGTCAAAGACTCGAAGGAGCATAAAGATTCTAATACTGGAGCATTTATCAAACCTTGTATGTCAAAGGATGCTAAGAAGAAAAGAAGAAAGGAGGTTCCAAAATCACCAGAAAAGAGAGAACAAGATCATCAGGAGGAAATTCATATTATTTCTTCTGGAGATGACGATGGCTCAAATGGAATGAAAAAATGGATCATGGAATACCATCAAAGTAGACCAGGATTGGAGGTGTTGCAACATCAAATTGACGATTTTGTAACTGATTACGAGGAGAAATTGGAAGAGGAAAAAAAAGCAAAAGAAGCTCTTGCTGCAGAAGGGGGATGGACGGTGGTTGTACAACGCAAGGGTAGGAAGAAAACTACCGACTCTGAAAGTGGAATTGCCGTGGGCTCAGTTGCTCAAGCTGCTGTGGAGGATAAATTGGCCAAAAAGAAAAATAAAGGAGTTGGTCTAGATTTCTACCGCTTTCAAAAAAGAGAAGCTCAGAGAAATGAGCTAATGTTATTGCAGAGCAAATTTGAGGAGGACAAAAAACGAGGTGGTGTGGCTGGTGCAACCCTTGCTAAAACTATACAACATCACGCTCATGTCACTCTTATTGATCCGAAGGAATATTTTGAGATTCCATGGGCAAGTTTAAGGGCAATGGTGGAGCCATCGTTTGCAGAAAGGACAGTGATAAACCATAGAGAGTATTTCACAAAAGGTGACCTTATTATATCAAGTGCTATCAACATATCTGAATCTGAAGTCTTCACTGCAGATGGCCGTAAATTTTCCTATGATTATCTTGTTATTGCCACTGGTCACACAGAACCTATCCCTAAAACAAGGACAGAAAGAATAGATCAATACAAAGGAGAAAATACAAAGATAAAATCAGCACGTTCAGTTTTGATTATCGGAGGAGGTCCAACCGGCGTCGAGTTAGCCGCAGAAATTGCTGTTGATTTTCCTGACAAAAAAGTGACTATAGTGCATAAAGGATCAAGGTTGCTGGAATATATTGGGACAAAAGCTTCAAGAAAGACTTTAAAATGGCTTAAGTCAAGGAAAATTGATGTGAAACTAGAACAATCTGTTGACTTGGACTCTTTCACAAATGAAAATAGAACATATCGAACTTCACTTGGAGAAACTATTGAAGCAGATACACATTTTGTATGTATAGGGAAACCACTTGGTTCAGCTTGGCTTTCTGAAACTCTTTTGAAAAATGATTTGAATGGTGATGGAAGAATACAAGTTGATGAATACTTGAGAGTTAAGGGAAAGAACAATGTCTTTGCAATTGGTGATATTACAGATGTTCAAGAAATAAAACAAGGAGTGTTTGCACAAGGTCATGCAAAACTAGTTGCCAAGAATCTAAAGCTATTGATAGAAGGAGGAGGGAAAGAACCTAAACTTGGAACTTACAAGGCACAAGCACCAATGTCAATTGTTTCACTTGGAAGAAAACATGGTGTTGCACAGTTCCCTTTCATGACAGTTGTTGGAAGGTTTCCTGGTATGATCAAATCAGGAGATTTGTTTGTTGGGAAAACAAGAAAGGAATTAGGACTTGAACCTAATGTTAAAAAATCTTAA 2010 0.3806 MKVNKGKRDIRTGEKKKKRNLEQNVKDVETYVTVNNDDHGLKVMKRKKVKVSAGRKKNKDINVVATQRPEDDEVDLEEQSVVHEVQAIKGEKEKVTTTSRKRKNKDRNLVGRQRREDVEVDLEKENDGVMEHCDAKQEEVKDSKEHKDSNTGAFIKPCMSKDAKKKRRKEVPKSPEKREQDHQEEIHIISSGDDDGSNGMKKWIMEYHQSRPGLEVLQHQIDDFVTDYEEKLEEEKKAKEALAAEGGWTVVVQRKGRKKTTDSESGIAVGSVAQAAVEDKLAKKKNKGVGLDFYRFQKREAQRNELMLLQSKFEEDKKRGGVAGATLAKTIQHHAHVTLIDPKEYFEIPWASLRAMVEPSFAERTVINHREYFTKGDLIISSAINISESEVFTADGRKFSYDYLVIATGHTEPIPKTRTERIDQYKGENTKIKSARSVLIIGGGPTGVELAAEIAVDFPDKKVTIVHKGSRLLEYIGTKASRKTLKWLKSRKIDVKLEQSVDLDSFTNENRTYRTSLGETIEADTHFVCIGKPLGSAWLSETLLKNDLNGDGRIQVDEYLRVKGKNNVFAIGDITDVQEIKQGVFAQGHAKLVAKNLKLLIEGGGKEPKLGTYKAQAPMSIVSLGRKHGVAQFPFMTVVGRFPGMIKSGDLFVGKTRKELGLEPNVKKS* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4269 669 MobiDBLite consensus disorder prediction 85 151 - -
Psa7g4269 669 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 320 669 - -
Psa7g4269 669 Coils Coil 299 319 - -
Psa7g4269 669 SUPERFAMILY FAD/NAD(P)-binding domain 320 474 IPR036188 -
Psa7g4269 669 MobiDBLite consensus disorder prediction 172 191 - -
Psa7g4269 669 Gene3D - 290 320 - -
Psa7g4269 669 ProSitePatterns EF-hand calcium-binding domain. 547 559 IPR018247 -
Psa7g4269 669 Gene3D - 321 655 - -
Psa7g4269 669 Pfam Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain 209 319 IPR024326 -
Psa7g4269 669 Coils Coil 214 245 - -
Psa7g4269 669 Pfam Pyridine nucleotide-disulphide oxidoreductase 320 588 IPR023753 GO:0016491
Psa7g4269 669 MobiDBLite consensus disorder prediction 1 21 - -
Psa7g4269 669 MobiDBLite consensus disorder prediction 85 197 - -
Psa7g4269 669 SUPERFAMILY FAD/NAD(P)-binding domain 438 598 IPR036188 -
Psa7g4269 669 PANTHER APOPTOSIS-INDUCING FACTOR 1 320 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4269 Psa-Chr7 346965243 346971853 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4269 K22745 - gmx:100817682 579.711