Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4249 ATGAACTACTCAAATCACTGTCTTCCCAAAACCCATTTTCTCAAAGTTCCCACCTTTCACCCTTTCTTCAAATTCAACCCATTCCCATACACTAACTATGCTTCAAACAGAACTCATACTCTCTCATTCACCATCAACTGCAGCCTCAAAAACGTGGGGAAGAAGGACTTATTGTCCCGGAAGATTGTCTTATCAGAAGCTCCTCCTCCACCACTCACACAGGATAATGATGCTCCTTCAACTTCAAAGGAAAAGAAAGGCCCTAGTGGTTTGTTTAAGAAGTTGAGCAAAAGGGTCTTGCAGATTCTCTCTAATTTGCCTTTGGCTATTGGAGAAATGTTCACCATTGCTTTTTTAATGGGCTTGGGCACTTTTATTGAACAAGGTGAGACTCCTGAGTTTTATTTCCAACACTACCCTGAAGATCATCCTGTCTTAGGATTTTTTACTTGGAGATGGATTTTCTTCCTTGGTTTTGATCACATGTATTCGGCGCCTATATTTCTTGGCATGTTGGTTCTTCTTGCTGCTTCCCTTATGGCCTGCACATACACGACACAGCTCCCACTCATCAAGGTTTCTAAAAGATGGTCATTTATGCACTCTGCCGAGGTCATACGCAAGCAAGAGTTTTCAGAAGCGTTGCCCAGAGCATCAATCCAAGATGTTGGTACTATACTAATGGGAGCTGGATATGAGGTATTCTTGAAAGGACCAACTTTGTATGCTTTCCGTGGACTTGCCGGTCGGCTAGCCCCAGTTGGAGTTCACATAGCACTTTTGTTGATAATGGCTGGAGGAACTTTAAGTGCTGCAGGGAGCTTTAAAGGTTCAGTCAATGTGCCTCAGGGGCTAAATTTTGTTGTAGGAGATGTTCTCGGTCCTACTGGCTTTCTTTCGTCTCCGACTGATGCTTTTAATACAGAGGTTCATGTCAACAGATTCTCTATGGATTATTATGAAAGTGGAGAGGTTTCACAGTTCCGCACCGATCTTTCCCTGTTGAACATGGATGGGAAAGAAGTAATGAGAAAAACAATTAGTGTAAATGATCCTTTAAGATACGAGGGTATCACGATATACCAAACGGATTGGAGTATTTCAACTCTACAAGTTCTCAAGGACAAAGAAGGACCTTTTAATTTGGCTGTGGCACCTCTTAAGATCAATGGAGATAAGAAACTTTATGGTACTTTTCTACCTGTTGGAGATGTTAACTCTCCTAATGTCAAGGGAATATCTATGCTTGCTCGTGACCTGCAATCGATTGTCCTTTATGATACGGAAGGGAAGTTTGCCGGAGTTAGACGACCTAATTCAAATCTCCCAATCAACATTGATGGCTCAGAAATTGTCATTGTTGATGCAATAGGAAGTAGTGGCCTGGACTTGAAGACTGACCCTGGTGTGCCAGTTGTGTATGCTGGCTTTGGTGCTCTAATGCTCACTACTTGCATCAGCTACTTATCTCACTCACAGATATGGGCCTTACAAGACGGGACAACAGTCGTCATCGGAGGGAAGACAAATAGAGCAAAATTAGAGTTTCCGGACGAGATGAACCTCTTGCTTGACAAAATCCCTGAAATAGTTGAATCATCATCTCTATCTAAGCAAAGCTGA 1623 0.4245 MNYSNHCLPKTHFLKVPTFHPFFKFNPFPYTNYASNRTHTLSFTINCSLKNVGKKDLLSRKIVLSEAPPPPLTQDNDAPSTSKEKKGPSGLFKKLSKRVLQILSNLPLAIGEMFTIAFLMGLGTFIEQGETPEFYFQHYPEDHPVLGFFTWRWIFFLGFDHMYSAPIFLGMLVLLAASLMACTYTTQLPLIKVSKRWSFMHSAEVIRKQEFSEALPRASIQDVGTILMGAGYEVFLKGPTLYAFRGLAGRLAPVGVHIALLLIMAGGTLSAAGSFKGSVNVPQGLNFVVGDVLGPTGFLSSPTDAFNTEVHVNRFSMDYYESGEVSQFRTDLSLLNMDGKEVMRKTISVNDPLRYEGITIYQTDWSISTLQVLKDKEGPFNLAVAPLKINGDKKLYGTFLPVGDVNSPNVKGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCISYLSHSQIWALQDGTTVVIGGKTNRAKLEFPDEMNLLLDKIPEIVESSSLSKQS* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4249 540 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 71 534 IPR023494 -
Psa7g4249 540 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 96 525 IPR023494 -
Psa7g4249 540 MobiDBLite consensus disorder prediction 69 89 - -
Psa7g4249 540 Pfam ResB-like family 108 371 IPR007816 -
Psa7g4249 540 Pfam ResB-like family 407 520 IPR007816 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4249 17 540 Miscellaneous Gene Families AT1G49380 68.762 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4249 K07399 - gmx:100807003 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4249 7 345939969 345942933 Psa7g4249 7 345939969 345942933 ECH