Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4243 ATGGAAGCATACAAGAAGGTTTTGATTGTGGGAATGTTGCTGGTCATTGCTAATACTATGTTTGCTAATGGTGTGACAATCTGTAACATGACAAGAGACGAGCGAAAGGCATGCGAGCCTTATGTGAGTAACGAGAAGAATTACACGCATGTTAGTTATAAAGTTCCATCCCATGCTTGCTGTTCTGCTACTGCCAATGCTGATCTTCAATGCTTCTGTGGTTATAAGGATTCAGGGTTGCTTTCTTTATATGGTATTAATCCTAAACAAGCCTTGGAACTTCCTGTTAAGTGTAAGATTGTGGACGCTTTCCATTGCAAGTGA 324 0.4043 MEAYKKVLIVGMLLVIANTMFANGVTICNMTRDERKACEPYVSNEKNYTHVSYKVPSHACCSATANADLQCFCGYKDSGLLSLYGINPKQALELPVKCKIVDAFHCK* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4243 107 Pfam Probable lipid transfer 24 105 IPR016140 -
Psa7g4243 107 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 104 IPR036312 -
Psa7g4243 107 CDD nsLTP_like 28 106 IPR044741 -
Psa7g4243 107 Gene3D - 24 106 IPR036312 -
Psa7g4243 107 PANTHER LIPID TRANSFER PROTEIN 4 106 - -
Psa7g4243 107 PANTHER LIPID BINDING PROTEIN-RELATED 4 106 IPR039265 GO:0005504|GO:0009627
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4243 Psa-Chr7 345785453 345786416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4243 5 106 Acyl Lipid Metabolism Gene Families AT5G48490 39.423 2.00e-16 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4243 - - aprc:113865173 119.012