Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4225 ATGCAAGTAGATACCTCTCTTTTTGGATTGTCACCTCAAGATGCAATAGCTTCGCCATTTATTGCATCTATGGGGGTTTACGTATTCAAGACCGATGTTTTACTCAAGCTTCTGAAATGGAGGTATCCCACATCCAATGACTTTGGATCTGAAATCATTCCAGCATCAGTGAAGGAATACAATGTCCAAGCGTTCTTTTTCGGAGACTATTGGGAAGACATTGGAACAATACGATCATTTTACGATGCTAACATGGCTCTTACCGAAGAGAGCCCAATGTTCAAATTTTATGATCCCAAGACACCTATTTTCACTTCTCCAAGATTCTTACCACCAACGAAGATTGATAAATGCAGGATTGTGGATGCAATAATCTCACACGGCTGTTTCCTGAGAGAATGTAGTGTGCAACACTCCATTGTGGGTGAACGTTCGCGTTTGGATTATGGCGTTGAGCTCAAGGACACTATAATGATGGGAGCAGACTATTACCAAACCGAATCTGAAATTGCTTCTGAGCTAGCAGAGGGAAAGGTTCCGATTGGGATTGGAAGGAACACCAAAATCAGGAAGTGTATAATAGACAAGAATGCTAGGATTGGGAAAGATGTCATCATGAACAAGAGATGGTGTTCAAGAAGCAGATAG 648 0.4151 MQVDTSLFGLSPQDAIASPFIASMGVYVFKTDVLLKLLKWRYPTSNDFGSEIIPASVKEYNVQAFFFGDYWEDIGTIRSFYDANMALTEESPMFKFYDPKTPIFTSPRFLPPTKIDKCRIVDAIISHGCFLRECSVQHSIVGERSRLDYGVELKDTIMMGADYYQTESEIASELAEGKVPIGIGRNTKIRKCIIDKNARIGKDVIMNKRWCSRSR* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4225 215 Pfam Nucleotidyl transferase 20 89 IPR005835 GO:0009058|GO:0016779
Psa7g4225 215 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 208 IPR011831 GO:0005978|GO:0008878
Psa7g4225 215 CDD LbH_G1P_AT_C 111 206 - -
Psa7g4225 215 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 108 IPR029044 -
Psa7g4225 215 SUPERFAMILY Trimeric LpxA-like enzymes 105 206 IPR011004 -
Psa7g4225 215 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE 1 208 - -
Psa7g4225 215 SUPERFAMILY Nucleotide-diphospho-sugar transferases 17 142 IPR029044 -
Psa7g4225 215 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 22 32 IPR005836 GO:0005978|GO:0008878
Psa7g4225 215 Gene3D Hexapeptide repeat proteins 109 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4225 Psa-Chr7 342938218 342939963 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4225 K00975 - gmx:100808791 381.333