Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4197 ATGGATCATCGAACCTTCATTCTCTTGTTTATTGTTTTCCTCTTCTCCGTCACGGCGTTCTCATCCGAGACACCGAATGACGGCGAAGATCCAATAATCCGGCAGGTGGTCGATGGCGGAGGAGTGCGGTTGGGAGCAGAGTATCACTTTAATCAATTCAAACATAGGTTCGGGAAGGTCTATTCTTCCAAGGATGAGCATGATTACAGATTCAATTTGTTTAAGACTAACCTGCACCGCGCTAAGAGACATCAGATAATGGATCCTTCGGCGGTTCACGGTGTTACGCGTTTCTCGGATCTGACTCCGCGGGAGTTCCGGCATTCCGTTTTGGGATTGAGAGGGTTAAGTTTGCCGTCTGATGCAACACCAGCTCCTATTCTTCCTACTGATAATCTTCCTGCTGATTTTGATTGGAGAGAGAAAGGAGCAGTTACCGCCGTTAAGAATCAGGGTTCTTGTGGATCGTGTTGGAGTTTCAGCACCACTGGTGCTCTTGAAGGTGCTCATTACCTCGCTACTGGAGAACTTGTCAGTCTTAGTGAGCAACAACTCGTTGATTGTGATCATGAGTGTGATCCTGAGGAGGCGGGTTCTTGCGACTCCGGTTGCAATGGTGGATTGATGAATAGTGCTTTTGAGTACATTCTAAAATCTGGTGGAGTCATGCGAGAGAAAGACTATCCATATTCTGGAACTGATAAAGGTGTCTGCAAATTCGACAAGACGAAGATTGCTGCATCAGTGGCGAATTTCAGTGTTGTTTCGCTTAATGAAGACCAGATTGCTGCCAATCTTGTGAAAAATGGCCCTCTTGCAGTTGCTATAAATGCGGTATTTATGCAGACATATATTGGAGGAGTATCATGTCCATATGTATGTTCAAGGAGGCTTGATCATGGAGTGTTACTGGTTGGATATGGTTCTGGAGCGTATGCGCCGATTAGGATGAAAGAGAAGCCATATTGGATCATTAAAAACTCATGGGGAGAGAATTGGGGAGAAAATGGATACTACAAGATTTGCCAGGGAAAAAATATTTGTGGAGTGGACTCCATGGTTTCTACTGTGGCTGCTGTTCATACTACTGCTACTACTACTCAGTAG 1107 0.4517 MDHRTFILLFIVFLFSVTAFSSETPNDGEDPIIRQVVDGGGVRLGAEYHFNQFKHRFGKVYSSKDEHDYRFNLFKTNLHRAKRHQIMDPSAVHGVTRFSDLTPREFRHSVLGLRGLSLPSDATPAPILPTDNLPADFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYILKSGGVMREKDYPYSGTDKGVCKFDKTKIAASVANFSVVSLNEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYVCSRRLDHGVLLVGYGSGAYAPIRMKEKPYWIIKNSWGENWGENGYYKICQGKNICGVDSMVSTVAAVHTTATTTQ* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4197 368 Pfam Papain family cysteine protease 133 356 IPR000668 GO:0006508|GO:0008234
Psa7g4197 368 SMART Inhibitor_I29_2 50 106 IPR013201 -
Psa7g4197 368 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 35 359 - -
Psa7g4197 368 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 151 162 IPR000169 -
Psa7g4197 368 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 322 341 IPR025661 -
Psa7g4197 368 PRINTS Papain cysteine protease (C1) family signature 151 166 IPR000668 GO:0006508|GO:0008234
Psa7g4197 368 PRINTS Papain cysteine protease (C1) family signature 300 310 IPR000668 GO:0006508|GO:0008234
Psa7g4197 368 PRINTS Papain cysteine protease (C1) family signature 322 328 IPR000668 GO:0006508|GO:0008234
Psa7g4197 368 CDD Peptidase_C1A 134 355 IPR039417 -
Psa7g4197 368 SMART pept_c1 133 358 IPR000668 GO:0006508|GO:0008234
Psa7g4197 368 Pfam Cathepsin propeptide inhibitor domain (I29) 50 106 IPR013201 -
Psa7g4197 368 Gene3D Cysteine proteinases 37 358 - -
Psa7g4197 368 SUPERFAMILY Cysteine proteinases 48 357 IPR038765 -
Psa7g4197 368 PANTHER CYSTEINE PROTEASE RD19C-RELATED 35 359 - -
Psa7g4197 368 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 298 308 IPR025660 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4197 Psa-Chr7 341006436 341008101 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4197 K01373 - gmx:100812198 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4197 7 341006436 341008101 Psa7g4197 7 341006436 341008101 ECH