Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4174 ATGTCCTCCTCCGTCGATCGTTTCGCTCTTCCATGTTTTGAGGGTTTTTCTGGTAGTGATGAGAAAAGAGAAAGGAGATCTGATTTTGAGAACTCTGAGGACGAGAGAAGGACTAGAATGGGGTCGCTTAAGAAGAAAGCTCTTCACGCTTCTTCTAAGCTTAAACATTCTCTTAAGAAGAAAGGTGGCAGGACGAAAAGCGATGGCAGAGTTAGTTCTGTTTCCATTGAGGATATTCGTGATGTCGAAGAGCTTCAAGCTGTTGATGCGTTTCGCCAGTCGTTGATCCTCGATGAATTGCTTCCTCAAAAGCATGATGATTATCATATGATGTTAAGATTTCTTAAAGCGAGGAAGTTTGATATTGAAAAAGCTAAGCATATGTGGGCTGATATGCTACAATGGAGGAAGGATTTTGGTGCGGATACGATCATGGAGGAATTTGAGTTCAAAGAAATAAATGAAGTAGTCAAGTATTATCCACATGGTCATCATGGTGTTGATAAGGAGGGAAGGCCTGTTTACATTGAAAGACTTGGAAAAGTGGATCCAAACAAACTTATGCAAGTTACAACTATGGATAGATATGTCAAGTACCACGTAAGGGAGTTTGAGAAATCTTTTGCAATAAAGTTTCCTGCTTGCACTATTGCTTCTAAGAGGCACATAGATTCAAGCACTACAATCTTAGATGTTCAAGGCGTGGGCCTTAAGAACTTTTCAAAAGCTGCCCGCGAACTCATTACGCGGTTACAAAAGATTGACGGTGACAATTATCCGGAGACTCTATGCCAAATGTTTATCATAAATGCTGGCCCTGGGTTTAGGATGCTGTGGAGCAGTGTCAAATCTTTTCTTGATCCCAAAACAACTTCGAAGATTCATGTTCTTGGGAACAAATACCAAAGCAAATTGCTTGAAGTAATCAATGCAAGCGAGTTGCCAGAATTTTTGGGAGGTAGCTGCACATGTTTAGATCAGGGAGGTTGCCTCAGATCCGATAAAGGCCCCTGGAATAACCCTGAAATTAAGAAGATGATTCTAAGTGGTGAAGCTAAGCGGCCAAGGCAAGTGGTAAAAGTTTTAAACAGTGAGGGAAAGGTTATTGCATATGCTAAGCCACGAGGCCCAATGGTAAAAGGCAGTGATACATCCACAGCGGAATCGGGGTCTGAAGCTGAAGACATAGCTTCTCCAAAAGCGATGAAAAGTTACTCAAACCTAAGGTTGACTCCTGTTCGTGAGGAATCAAAGGTAGTTGGAAAGTCAAGCTATGCTGTTAGTGGTAACTTAGCTGGGTATGATGAGTACATTCCAATGGTAGACAAAGCTGTTGATGCTGTCTGGAAGAAACAAGCATCGCTCCAGACGTTACCTAGTAGAAAAGGAACCCCCCTTCCTGACACTCCAAAGCCACCAGAAAGTATTCAAGCTCGGATTTGGATAGCTCTCTCATTTTTCTTTTTGACTATGTTTACTTTCTTCCATTCACTTGCATGGCATGTCACCAAGAAACTTCCATCAGTATCATTCAATAAGAGTACTTCAGAGCTAACTCTTGATACCACAAACAAGTCCCCAACTCCATCAAATACAAAGACAAGTGCCTTATCCTCCATGATGAAAAGGTTAACTGAGCTCGAAGAGAAGGTTGACATGCTAAAGTCTAAGCCATCTGAGATGCCTTGGCAGAAAGCAGAATTACTAAATGCTGCTGTCTGCCGGGTGGATGGTTTGGAGGCAGAGCTAATTGCAACTAAAAAGGCTCTCTACGAAGCGTTAATGAGGCAAGAAGAGTTGCTTGCTTACATTGATAGTCAAGAAGAAGCTAAGTTGCGGCGGAAGAAGTCTTGCTGGTGA 1860 0.422 MSSSVDRFALPCFEGFSGSDEKRERRSDFENSEDERRTRMGSLKKKALHASSKLKHSLKKKGGRTKSDGRVSSVSIEDIRDVEELQAVDAFRQSLILDELLPQKHDDYHMMLRFLKARKFDIEKAKHMWADMLQWRKDFGADTIMEEFEFKEINEVVKYYPHGHHGVDKEGRPVYIERLGKVDPNKLMQVTTMDRYVKYHVREFEKSFAIKFPACTIASKRHIDSSTTILDVQGVGLKNFSKAARELITRLQKIDGDNYPETLCQMFIINAGPGFRMLWSSVKSFLDPKTTSKIHVLGNKYQSKLLEVINASELPEFLGGSCTCLDQGGCLRSDKGPWNNPEIKKMILSGEAKRPRQVVKVLNSEGKVIAYAKPRGPMVKGSDTSTAESGSEAEDIASPKAMKSYSNLRLTPVREESKVVGKSSYAVSGNLAGYDEYIPMVDKAVDAVWKKQASLQTLPSRKGTPLPDTPKPPESIQARIWIALSFFFLTMFTFFHSLAWHVTKKLPSVSFNKSTSELTLDTTNKSPTPSNTKTSALSSMMKRLTELEEKVDMLKSKPSEMPWQKAELLNAAVCRVDGLEAELIATKKALYEALMRQEELLAYIDSQEEAKLRRKKSCW* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4174 619 MobiDBLite consensus disorder prediction 517 537 - -
Psa7g4174 619 SUPERFAMILY CRAL/TRIO N-terminal domain 82 147 IPR036273 -
Psa7g4174 619 CDD SEC14 150 320 IPR001251 -
Psa7g4174 619 MobiDBLite consensus disorder prediction 18 41 - -
Psa7g4174 619 SMART sec14_4 152 323 IPR001251 -
Psa7g4174 619 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH8 4 616 - -
Psa7g4174 619 Coils Coil 537 557 - -
Psa7g4174 619 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Psa7g4174 619 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Psa7g4174 619 MobiDBLite consensus disorder prediction 18 70 - -
Psa7g4174 619 Gene3D - 140 350 IPR036865 -
Psa7g4174 619 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Psa7g4174 619 Gene3D - 76 139 - -
Psa7g4174 619 MobiDBLite consensus disorder prediction 42 63 - -
Psa7g4174 619 MobiDBLite consensus disorder prediction 377 396 - -
Psa7g4174 619 SUPERFAMILY CRAL/TRIO domain 152 345 IPR036865 -
Psa7g4174 619 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 326 IPR001251 -
Psa7g4174 619 Pfam CRAL/TRIO domain 159 320 IPR001251 -
Psa7g4174 619 Pfam CRAL/TRIO, N-terminal domain 105 131 IPR011074 -
Psa7g4174 619 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 4 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4174 Psa-Chr7 340150920 340156289 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4174 86 317 Acyl Lipid Metabolism Gene Families AT5G47730 28.216 9.03e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4174 - - gmx:100785793 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4174 7 340150920 340156289 Psa7g4174 7 340150920 340156289 ECH