Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4163 ATGGGTTTTCGTTTCTCTGGTATCATGAGAAAGGCATCATTTGCTGCAAACCGATCAGCTTCGAAAACTGCCGACATGCCAAAAGGATATCTTGCTGTATATGTTGGAGAAAAACAAAAGCGGTGTGTAATCCCCATATCATACTTGAACCAACCATCGTTTCAAGACTTGTTGTGCGAAGCTAAGGAAGAGTTTGGATACAATCATCCCATGGGTGGCCTCACTATTCCTTGTACCGAAGATGTCTTCCAAAATATAACGTCTCGCTTTAATGGGCTATGA 282 0.422 MGFRFSGIMRKASFAANRSASKTADMPKGYLAVYVGEKQKRCVIPISYLNQPSFQDLLCEAKEEFGYNHPMGGLTIPCTEDVFQNITSRFNGL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4163 93 Pfam Auxin responsive protein 13 88 IPR003676 GO:0009733
Psa7g4163 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 91 IPR003676 GO:0009733
Psa7g4163 93 PANTHER AUXIN-INDUCED PROTEIN 6B 6 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4163 Psa-Chr7 339149227 339150648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4163 23 88 Calmodulin-binding Proteins AT4G34750 43.939 1.11e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4163 K14488 - gmx:100816803 147.902