Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4153 ATGGGTTTTCGTTTTCCTAGTATGATCAGAAGAGCATCATCTTCAAAAGCTATGACCATGCCAAAAGGATATGTTGCTGTGTATGTTGGAGAGAAACTAAAGCGATTTGTGATTCCAATATCATACTTGAATCAACCTTCGTTTCAAGACTTGCTGTGTAAAGCCGAGGAAGAGTTTGGATACGATCATCCGATGGGTGGCCTCACCATTCCTTGCACAGAAGATGTGTTCCAAAATATAACTTGTGGCTTGAATGGACTATGA 264 0.4053 MGFRFPSMIRRASSSKAMTMPKGYVAVYVGEKLKRFVIPISYLNQPSFQDLLCKAEEEFGYDHPMGGLTIPCTEDVFQNITCGLNGL* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4153 87 Pfam Auxin responsive protein 12 82 IPR003676 GO:0009733
Psa7g4153 87 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 10 85 IPR003676 GO:0009733
Psa7g4153 87 PANTHER AUXIN-INDUCED PROTEIN 6B 10 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4153 Psa-Chr7 338777864 338778521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4153 20 78 Calmodulin-binding Proteins AT3G43120 55.932 5.10e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4153 K14488 - gmx:100787155 139.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4153 7 338777864 338778521 Psa7g4153 7 338777864 338778521 ECH