Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4143 ATGGCATTTTGCTTGCCATTGATAATGCAAGCTAAGAACCATATCCTTAGCCACACATTTTCAAAAGTTAAAAAAGTGTTGTCAGCTAACTGTAATATACCAAAAGGGTATTTAACAGTTTATGTTGGAGAAGAGAAAAAGAAGAGATTTGTGGTTCCAATATCATATTTGCATCAACCTGCTTTTCAACAGTTTCTTTGTAGAGCGGAAGAAGAGTTCGGATTTAACCATCCGATGGGCGGTCTCACGATTCCTTGCAGAGAAGAGATCTTTGTTAATGTAACTTCTCAATTGGAAAGTTAA 303 0.363 MAFCLPLIMQAKNHILSHTFSKVKKVLSANCNIPKGYLTVYVGEEKKKRFVVPISYLHQPAFQQFLCRAEEEFGFNHPMGGLTIPCREEIFVNVTSQLES* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4143 100 PANTHER SMALL AUXIN-UP RNA-RELATED 22 99 - -
Psa7g4143 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 22 99 IPR003676 GO:0009733
Psa7g4143 100 Pfam Auxin responsive protein 27 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4143 Psa-Chr7 338283894 338284196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4143 32 91 Calmodulin-binding Proteins AT3G43120 51.667 2.11e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4143 K14488 - qsu:112040181 125.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4143 7 338283894 338284196 Psa7g4143 7 338283894 338284196 ECH