Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4111 ATGGAAGAAGAGACAAAAGTCATTTCAGAAGTTCCGGTGACAAAGGTTGTTGAAGAAGTGGATCACAAAGGTGTTGACATTAAGGCAACAAATGGAGACTTGCCGGCCAAGGAAATAGCCGAAGGAAAGAAAGACGAGGAAGATAATGCCTCGGATGGAGAGTTCATTAAAGTCGAGAAGGAAGAGAATGTGGTTGACGATACGTCCAACAAAACTGAAAGAAGCTCGGATCCTCCTAGCAGAGAATTTCTTGAAGCGCAAGAGAAGGTTCGGGAGCTCGAGGCTGAAGTGAAAGCACTCGCAGGATCTTTGAAGACATCTGAACATGAAAACGCTGCGCTGAAGGGAGAGGTCTCGGAAACAAAGGAGAAATTGAAAGAAACTGGAAAGAAAACCGAAGAGCTTGAACTAAGTCACAAGAAACTGCAAGAGCAGATTGTTGAAGCCGAGAAAAAGTACAATCTGCAGGTCAGCACTCATGAAGAGGTTCTGAAAAGTCAAGAAGTTAAGGAGAAAGAGCTTCTTGAGGTGAAGGAAGCATTTGATGATCTGAATGTCAAGCTCGAAAGCTCCCGAAAGAAGACACTGGAGTTGGAGAATGAGCTGCAAGTTTCTAAGGACGAGGCACAGAAGTTCGAGGAGCTGCATAAGAAAAGCGTTTCACATGCTGAATCTGAGGGAAACAAGGTGATAGAATTTGAGAGACTACTTGAAGAAGCGAAATCGAGTGCGAAAGGCAAGGAAGATGAGATCACTTCTCTGAAGGAAGAATTGAAGGGAGTTAATGATAAGGTTGCTGAAAAGGAAAAGGTTGAAGAAGCACTTAAAACGACTGCAGCTGAACTCTCTACTGTCCAAGAGGAGTTGGCACTCTCCAAGACACACGTATCGGAAGTTGAGCAAAGACTGTCTTCAAGAGATTCGCTCGTAGACGAGTTGACGAAGGAACTAAACCTGATCAAGACTTCAGAAACACAGATAAAAGAAGATTTGTCAGCGCTTCAAAACCTATTTGTTTCTACAAAGGAAGAGCTAAAAGAAAAAAGTTCCGAGTTGGAAAGTGCAAGGCTCAAGCTGCAGGAGGAGGAAACATCGAAAGAATCAATTGAAGTTTCATTCAAGAGCCAGGAAGCGAAGTTTCTGTCGGTACAAGAGGAACTGACTAAGCTCAATGCAGAAAAGAAAAAACTCGAGGAAACTTTTGAAGATCTAACCGTTAATGAGAAACACTTTAAGGAGTTGTCCACTGATTTAGAGGCGAAACTAAAGCTTTCGGAGGAAAATTTTAGTAAAACGGATTCTCTTTTATCTCAGGCGCTTTCGAACAATTCAGAGCTGGAGCAGAAGGTGAAGTCTTTGGAAGACCTTCATAATGAAGCTGGATCTGTCGCAGCTACTGCGACTCAAAGGAGTCTTGAGCTTGAGGGACATATTGAAACTACAAATGCAGCTGCAGAAGAGGCAAAATCACAGCTACGAGAGCTCGAAACACGCTTCATAACAGTGGAGCAGAAGAATGTTGAGCTTGAGCAACAATTAAATTCAGTGCAGTTGAAAGCCAATGAAGCTGAGAGAGACGTGACTGAATATTCCGAGAAAATTTCTCATCTCGATGCTAAATTGAAAGAGGCCGAGGAAGCGAAGAATCTTCTTAATGGCCTACTGCAGGAGCACACAGATAAGGTAAGTCAACTTGAATCAGATTTAAACCAATCAATCAAGCAGAAATCACAATTGGAGGAGGAGCTGAAGATACTTACCGAGAAATGTTCTGAGCATGAAGATCGAGCTACCACATACAGTCAACGCAGCCTAGAACTAGAAGGTTTAATTCAGAGCTCTCATTCCAAATCGGAAAGTTCTGAAAAGAGAGTGAGTGAGTTGGAGTTGCTACTTGAAACTGAGAAATACAGAATTCAGGAACTTGAACAACAAACAAGCACATTAGAAAAGAAATATAGTGAGTCAGAAGAAAATTCCAATAAACAACTTGAGAATGTGTCTTATCTGACATCAGAACTTGATGTGTTTCAAGCTCGAACCTCAACCCTCGAAAGTACACTGCAAGAAGCGAATGAAAGGGAAAAAGAGTTAAAAGAATCTTTAAATGCTGTGACGGATGAAAAGAAAAAGTTAGAAGATTCTTTAAACAGTTTGAGTGAGAAGTTTTCTGAGGCGGAAAACCTATTGGAAATTGTGAGGGATGATTTAAATCTCACACAAGTTAAGTTGCAAAGCACTGAAAATGATCTCAAGGCTGCTGAATTAAGAGAGAGCGAGATAACAGAAAAACTTAATGCTACTGAAGAAAATCTTGTTGTAAAGGGAAGAGATATAGAGCATACTACTGCCAGAAACTTAGAACTCGAGTCGTTACATGAATCTCTGACAAGAGATTCCGAACAGAAGCTCCAAGAAGCTATTGAAAAATTCAACAGCAAAGATTCTGAGGTTCAATCTCTGCTTGAGAAAATTAAGATTCTGGAGGAGAATATTGCAGGAGCCGGTGAACAGTCTGCATCTTTGAAGAGTGAATTCGAAGAGAGTTTGAGCAAACTCGCTTCATTGCAAAGCGAAAATGAAGATTTGAAAAGGAAAATTATCGAAGCTGAGGACAAGACTTCGCAGTCGTTTTCCGAGAACGAATTACTGGTTGGAACAAACGTTCAACTGAAATCAAAGATTGATGAACTTCAGGAGTCGTTGAAGAGTGTTCTATCTGAGAAGGAAGTCACTGCTCAAGAACTTGATTCGCATAAGAACTTAGTAGCTGAATTGAATGATGTACACTCAAAATCTTCCGCAATTCATTCTGCCAATGAAGCTCGCATCGTGGAATTAGAATCTCAGTTACAAGAAGCTTTGAAGAAGCACACTGAGAAGGAATCAGAAACCAAAGAATTGAATGAGAAGCTGAATACTCTAGAAGGACAGATAAAGTTGTACGAAGAACAGGCGCGAGAAGCCGTTGCAACGTCTGAAACTCGTAAAGCTGAGCTTGAGGAGAATCTCGTGAAATTAAAGCATCTTGAAACAGTTGTTGAGGAGCTACAAAACAAGTCAGTCCACCATGAAAAAGAAACTGCTGGAGTAAAGGAGGAAAATTCGAAACTTGTTCAGGAAATAGCTGTCTATGAAACCAAATTAAGTGATTTACAGTCAAAGCTCACTGCAGAACTTGCCGAAAAGGACAACACAGTTAATGAGCTACTCTCATCGAAGAACGCCGCGGAAGACTTAGTGACAAAGCTCAGTGAGGAGGTGCAGACATTGAAGTCACAGATATCTTCGGTAATAGACGAGAAGAATTTGCTCAATGAGACTAATCAGAACTTAAAGAAGCAACTTGAGTCTATGATACTTGACCTTGAAGAGAAGTTGAAGGAGCATCAGAAAAACGAAGACTCTTTGAGATCTGAGGTTGAAACACTCAAAGTTGAGATTACTGAGAAATCTGTATTGCAAAGCCGGGTCCAGGAAATTGAAGCGCAACTCGTGACAGCTGAATCTAAACTACATGAAGAGGTTGGAAGTGTTCAAGCTGCTGCTACTCAAAGAGAAGCTGATTTGAGTTCAAAATTTAAAGATTATGAACAAAAAATCAATGAAATAAATGTTCTGAATGGAAAGGTGGTAGAGCTTGAGAAAGAGTTGCAACTTGCACAGGCTGCTATAGCTAATCAGAAAGGAGCTGAATCTCAGAAGTTGGAACTAGAGGCAGCCTTGAAGAAATCTCAAGAAGAACTTGAAACTAAGAAAAATGAAATCTCTCTTCTACAAAAACAAGTACTAGATTTTGAGCAGAAATTGCAACAGGCTAGCGAGAAAGTCTCAGTCAAGGGTGAGGAGAGTGTTGATAAGAAGGATGGTGCGGAAGTGAAATCACGAGACTTTAGCATCTCGACTCCAACGAAAAGGAAGAGCAAGAAGAAGTCAGAAGCAACAACTGCTCAGGCATCAGCTTCTTCGGCCGAGACTCAAACTCAAACCGGCCAGGATTCGCCTTTCACGAGCTTCAAGTTCATCTTTGGAACTGCTCTTGTGTCCATTATCTTCGGCATTATTCTTGGGAAGCGTTATTAA 4083 0.4107 MEEETKVISEVPVTKVVEEVDHKGVDIKATNGDLPAKEIAEGKKDEEDNASDGEFIKVEKEENVVDDTSNKTERSSDPPSREFLEAQEKVRELEAEVKALAGSLKTSEHENAALKGEVSETKEKLKETGKKTEELELSHKKLQEQIVEAEKKYNLQVSTHEEVLKSQEVKEKELLEVKEAFDDLNVKLESSRKKTLELENELQVSKDEAQKFEELHKKSVSHAESEGNKVIEFERLLEEAKSSAKGKEDEITSLKEELKGVNDKVAEKEKVEEALKTTAAELSTVQEELALSKTHVSEVEQRLSSRDSLVDELTKELNLIKTSETQIKEDLSALQNLFVSTKEELKEKSSELESARLKLQEEETSKESIEVSFKSQEAKFLSVQEELTKLNAEKKKLEETFEDLTVNEKHFKELSTDLEAKLKLSEENFSKTDSLLSQALSNNSELEQKVKSLEDLHNEAGSVAATATQRSLELEGHIETTNAAAEEAKSQLRELETRFITVEQKNVELEQQLNSVQLKANEAERDVTEYSEKISHLDAKLKEAEEAKNLLNGLLQEHTDKVSQLESDLNQSIKQKSQLEEELKILTEKCSEHEDRATTYSQRSLELEGLIQSSHSKSESSEKRVSELELLLETEKYRIQELEQQTSTLEKKYSESEENSNKQLENVSYLTSELDVFQARTSTLESTLQEANEREKELKESLNAVTDEKKKLEDSLNSLSEKFSEAENLLEIVRDDLNLTQVKLQSTENDLKAAELRESEITEKLNATEENLVVKGRDIEHTTARNLELESLHESLTRDSEQKLQEAIEKFNSKDSEVQSLLEKIKILEENIAGAGEQSASLKSEFEESLSKLASLQSENEDLKRKIIEAEDKTSQSFSENELLVGTNVQLKSKIDELQESLKSVLSEKEVTAQELDSHKNLVAELNDVHSKSSAIHSANEARIVELESQLQEALKKHTEKESETKELNEKLNTLEGQIKLYEEQAREAVATSETRKAELEENLVKLKHLETVVEELQNKSVHHEKETAGVKEENSKLVQEIAVYETKLSDLQSKLTAELAEKDNTVNELLSSKNAAEDLVTKLSEEVQTLKSQISSVIDEKNLLNETNQNLKKQLESMILDLEEKLKEHQKNEDSLRSEVETLKVEITEKSVLQSRVQEIEAQLVTAESKLHEEVGSVQAAATQREADLSSKFKDYEQKINEINVLNGKVVELEKELQLAQAAIANQKGAESQKLELEAALKKSQEELETKKNEISLLQKQVLDFEQKLQQASEKVSVKGEESVDKKDGAEVKSRDFSISTPTKRKSKKKSEATTAQASASSAETQTQTGQDSPFTSFKFIFGTALVSIIFGIILGKRY* 1361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4111 1360 Coils Coil 937 1055 - -
Psa7g4111 1360 SUPERFAMILY Tropomyosin 229 426 - -
Psa7g4111 1360 Coils Coil 674 771 - -
Psa7g4111 1360 Coils Coil 804 873 - -
Psa7g4111 1360 Coils Coil 1067 1147 - -
Psa7g4111 1360 MobiDBLite consensus disorder prediction 28 84 - -
Psa7g4111 1360 Coils Coil 181 215 - -
Psa7g4111 1360 Coils Coil 83 152 - -
Psa7g4111 1360 Coils Coil 1197 1276 - -
Psa7g4111 1360 Coils Coil 331 372 - -
Psa7g4111 1360 SUPERFAMILY Tropomyosin 612 855 - -
Psa7g4111 1360 Coils Coil 1151 1171 - -
Psa7g4111 1360 Gene3D - 428 575 - -
Psa7g4111 1360 MobiDBLite consensus disorder prediction 1279 1313 - -
Psa7g4111 1360 MobiDBLite consensus disorder prediction 37 84 - -
Psa7g4111 1360 MobiDBLite consensus disorder prediction 1277 1330 - -
Psa7g4111 1360 PANTHER EARLY ENDOSOME ANTIGEN 1 1360 - -
Psa7g4111 1360 Coils Coil 436 463 - -
Psa7g4111 1360 Coils Coil 380 407 - -
Psa7g4111 1360 Coils Coil 888 915 - -
Psa7g4111 1360 MobiDBLite consensus disorder prediction 1314 1330 - -
Psa7g4111 1360 SUPERFAMILY Tropomyosin 436 608 - -
Psa7g4111 1360 Coils Coil 478 596 - -
Psa7g4111 1360 Coils Coil 230 288 - -
Psa7g4111 1360 Coils Coil 625 659 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4111 - K20283 aprc:113870018 1787.7