Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4106 ATGAACCTCGTACTTTCTTTGTTCAGTTTCTGCTCTATCTTTTATCTTGTTGCTGCTGAAGATCCTTATAGATTCTTCGACTGGAATGTTACCTATGGTGACATTTATCCTCTCGGAGTTAAACAACAGGGTATTCTTATCAATGGTCAGTTTCCAGGACCTGAAATTTACGCTGTAACCAATGATAATTTGATCATCAATGTACATAATAGCTTGCCCGAGCCATTTCTTCTCTCATGGAACGGTGTTCAACAAAGAAGAAACTCTTTTCAAGATGGAGTTTATGGTACAACATGTCCCATTCCTCCTGGTAAAAACTTCACATACAAACTTCAAGTCAAAGATCAAATTGGAAGCTTCTTCTATTTTCCATCTCTTGCTTTCCACAAAGCTGCTGGTGGTTTTGGATCCATCAAAATCCTTAGCAGACCATTGATTCCTGTTCCATTCCCTAATCCAGCTGATGATTTCACCGTCCTCATCGGTGATTGGTACAAACTCAATCACACGATCCTGAGGAGATTTCTTGATTTGGGACACAGACTTCCACTTCCTCAAGCTGTTCTTATCAACGGTCGCGCAAATTGGACAACATTCACAGTTGAACAAGGAAAAACGTATCGGCTTAGAATATCGAATGTTGGATTAGAAAACACACTCAATTTTAGGATTCAAGATCATACTATGAAATTGGTTGAAGTCGAGGGAACTCACACTCTGCAAACATCATATTCATCTATAGATGTTCATGTTGGACAATCTTATTCCGTGCTTATCACGGCTGATCAAGCACCTAAGGATTTCCACATTGTTGCTTCCACTCGATTCACCGAAAAGATCCTCACGAGTACTGCAGTACTTCACTATAGCAACTCACAAGGATCTCTTTCGGGCGTCATTCCTGGTGGACCAACCGAGATCGACTGGTCCATCCAACAAGCGCGATCAATCAGGACGAATCTTACTGCGAGTGGACCAAGGCCTAACCCACAAGGTTCGTACCACTACGGTACGATAAACATTAGTAGAACAATCAAGTTAATGAGCTCGGCCACAATCGTGAATGGTAAGCAAAGATACGCGGTCAACAGTGTTTCTTTCGTACCCGCCGACACTCCTCTGAAGTTGGCCGATTACTTCAAGATTGACGGAGTTTTCAAAGTTGGAAGCATCCCAGATAGCCCTTCCGGTAAATCAACTCATCTCGATACTTCAGTCATGGGTGCTGATTTCCGTTCCTTCGTTGAAATCGTGTTTCAAAACCGTGAAAGTATAGTCCAAAGTTGGCACATTGATGGATACTCATTTTGGGTCGTAGGAATGGACGGTGGTACGTGGACGCCTAATAGTCGTAACCAATACAACCTCCAAGACGCGGTGTCTAGGAGCACAACACAGGTATATCCTAGGTCATGGACTGCAATTTATATGGCACTAGACAATGTGGGAATGTGGAACATTAGGAGTGAATTTTGGGCACGACAATATCTTGGACAACAATTCTATTTGAGGGTATATTCAGATGCTGGATCCATTAGAGATGAATATCTAATTCCAGAAAATGCTCTTCTTTGTGGCAAAGCATTGGGGAGAAAAACTACACCATTATGA 1611 0.4215 MNLVLSLFSFCSIFYLVAAEDPYRFFDWNVTYGDIYPLGVKQQGILINGQFPGPEIYAVTNDNLIINVHNSLPEPFLLSWNGVQQRRNSFQDGVYGTTCPIPPGKNFTYKLQVKDQIGSFFYFPSLAFHKAAGGFGSIKILSRPLIPVPFPNPADDFTVLIGDWYKLNHTILRRFLDLGHRLPLPQAVLINGRANWTTFTVEQGKTYRLRISNVGLENTLNFRIQDHTMKLVEVEGTHTLQTSYSSIDVHVGQSYSVLITADQAPKDFHIVASTRFTEKILTSTAVLHYSNSQGSLSGVIPGGPTEIDWSIQQARSIRTNLTASGPRPNPQGSYHYGTINISRTIKLMSSATIVNGKQRYAVNSVSFVPADTPLKLADYFKIDGVFKVGSIPDSPSGKSTHLDTSVMGADFRSFVEIVFQNRESIVQSWHIDGYSFWVVGMDGGTWTPNSRNQYNLQDAVSRSTTQVYPRSWTAIYMALDNVGMWNIRSEFWARQYLGQQFYLRVYSDAGSIRDEYLIPENALLCGKALGRKTTPL* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4106 536 SUPERFAMILY Cupredoxins 339 527 IPR008972 -
Psa7g4106 536 PANTHER MULTI-COPPER OXIDASE 14 529 IPR045087 -
Psa7g4106 536 Pfam Multicopper oxidase 372 508 IPR011706 GO:0005507|GO:0016491
Psa7g4106 536 Gene3D - 154 327 IPR008972 -
Psa7g4106 536 Pfam Multicopper oxidase 156 291 IPR001117 -
Psa7g4106 536 Pfam Multicopper oxidase 30 142 IPR011707 GO:0005507
Psa7g4106 536 CDD CuRO_3_AAO_like_1 369 490 IPR034275 GO:0005507
Psa7g4106 536 Gene3D - 23 144 IPR008972 -
Psa7g4106 536 SUPERFAMILY Cupredoxins 150 328 IPR008972 -
Psa7g4106 536 PANTHER MULTI-COPPER OXIDASE TYPE I FAMILY PROTEIN-RELATED 14 529 - -
Psa7g4106 536 Gene3D - 337 532 IPR008972 -
Psa7g4106 536 SUPERFAMILY Cupredoxins 17 170 IPR008972 -
Psa7g4106 536 CDD CuRO_1_AAO_like_1 25 140 IPR034273 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4106 Psa-Chr7 336125000 336129276 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4106 - - gmx:100793934 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4106 7 336125000 336129276 Psa7g4106 7 336125000 336129276 ECH