Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4091 ATGGAGAGGAAAAGTGGAAAAGCTGTAGATGTTCTAGATGGTTCTAATATTATGGAGTTAGTTGGAAACAAAGATGTTTTCAGCAACTTCGTGAACCATAAGTTTCAAGAGTTGGATCGAGATAGAGATGGTAAACTTTCTGTGAACGAACTCAAACCTGCTGTTTCTGATATTGGTGCTGCTCTTGGTTTACCTCCTAAAGGCACTAATCCTGATTCTGATCACATCTATTCTGAGGTTTTGAATGAATTCACACATGGAAAGCATGAAAAAGTGAGCAAGACTGAGTTCAAAGAGGTTCTTTCAGACATTCTGTTGGGCATGGCTGCTGGACTCAAACGAGACCCGATTGTGATTCTTCGCATTGATGGCGAAGATCTTCTCGAGTTTCTCAATGGTTCAGTTTATGAACCCGAAATCGTATCTATATTCTCGCAAATTGAATCACCTCACGCATCTCTTCACGATCTTATAATTCAAGCTCTCAGCAAACTCAATGTTGATCAAGGGATTCCTCCTACTTCTGATCCTTGGGTTATTAACAACATTGTGGAACCAGCACTGCTTTCTGGACGTGGATCTAGTTTGAATAAGCCAGTTTCTCAAGAGATATTTATTGAAGAATTTAAGAGAGTGGCATTGCTCGTAGCGAATCGTCTTCGGGAGCAACCTGTCATAGTTGCTCATAGTGAAAGCAAATTTGATGGAAGTGGTGTTAAGAGACTATTATCAAATAAGTTTGAATTAGACAAGATTTTGAACTCAGCTATAGAGACTATCCCTAAAGATCGTAATGGAAAAATGTCAAAGGATTATCTCCGAGTGGCGCTGGATGTGGTGGCTCCGTCCGCTGCTTTACCTCCTTTTGGCGCAGTTCAAGAGATGGATAAGGTTATCGGTGAAGTGTTTAAGATGGTGAGTGCAGATGATGCGAAGTTGGTGAAAGAAGATGAGTTCAAGAAAGTATTAACTGAAATATTGGGGAGTCTCATGTTGCAGTTGGAAGGAAGTCCTATATCAGTTTCTTCAAATTCTGTAGTGCATGAGCCTCTGGGTTCATCTTCTACACTTTTGCAGCCATCCTCTACTACTGAAACAACAATAGCATAG 1110 0.4054 MERKSGKAVDVLDGSNIMELVGNKDVFSNFVNHKFQELDRDRDGKLSVNELKPAVSDIGAALGLPPKGTNPDSDHIYSEVLNEFTHGKHEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLLEFLNGSVYEPEIVSIFSQIESPHASLHDLIIQALSKLNVDQGIPPTSDPWVINNIVEPALLSGRGSSLNKPVSQEIFIEEFKRVALLVANRLREQPVIVAHSESKFDGSGVKRLLSNKFELDKILNSAIETIPKDRNGKMSKDYLRVALDVVAPSAALPPFGAVQEMDKVIGEVFKMVSADDAKLVKEDEFKKVLTEILGSLMLQLEGSPISVSSNSVVHEPLGSSSTLLQPSSTTETTIA* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4091 369 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 4 363 - -
Psa7g4091 369 Gene3D - 24 326 - -
Psa7g4091 369 ProSitePatterns EF-hand calcium-binding domain. 39 51 IPR018247 -
Psa7g4091 369 SUPERFAMILY EF-hand 33 335 IPR011992 -
Psa7g4091 369 SMART efh_1 298 326 IPR002048 GO:0005509
Psa7g4091 369 SMART efh_1 252 280 IPR002048 GO:0005509
Psa7g4091 369 SMART efh_1 30 58 IPR002048 GO:0005509
Psa7g4091 369 Pfam EF-hand domain pair 33 100 IPR002048 GO:0005509
Psa7g4091 369 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 4 363 - -
Psa7g4091 369 ProSiteProfiles EF-hand calcium-binding domain profile. 26 61 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4091 Psa-Chr7 335177633 335183305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4091 11 366 EF-hand Containing Proteins AT4G38810 68.524 4.43e-173 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4091 - - gmx:100820516 567