Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4087 ATGAGACCTCAGAAAACTTCGATCCACGCCATCTCCACATGGGTCAGGCGACAACCACCAAAGGTCAAGGCTTTTCTTGCCGTCGTTTCCGGCATGACCGCTCTTGTTATCCTCCGATTCATCGTTCACGATCACGATAATCTCTTTGTCGCTGCTGAGGCTGTTCACTCCCTCGGAATCTCCGTTCTTATCTATAAACTCATGAAAGAGAAGACCTGTGCCGGATTATCACTCAAATCCCAGGAATTAACAGCTATATTTTTAGCTGTTAGGCTGTATTGTAGTTTTGTCATGGAATATGACATACACACCGTACTTGATTTGGCTACTTTCGTCACTACCGTGTGGGTTATATACATGATTCGTTTTAAGCTAAAGGCTAGTTACATGGAAGAGAAGGATAACTTTGCAATATATTATGTGGTGTTACCATGTGCCGTGTTAGCCTTGGTTATTCATCCATCAACTTCTCATCATATATTGAACAGGATTTTCTGGGCATTCTGTGTATATCTGGAAGCTGTTTCAGTTCTACCCCAACTTCGGGTCATGCAGAACACCAAAATCGTTGAGCCATTCACCGCTCATTATGTATTTGCACTGGGTGTAGCAAGATTCTTGAGCTGTGCTCATTGGGTTCTCCAGGTGTTAGATACCCGTGGACATTTGTTGGTTGCCTTAGGGTATGGTTTATGGCCGTCAATGGTTCTTATCTCAGAAATTGTCCAGACATTCATCTTAGCCGATTTCTGTTACTATTATGTCAAAAGCGTTTTCGGAGGACAGCTTGTTCTGCGTCTTCCCTCTGGAGTGGTGTGA 819 0.4359 MRPQKTSIHAISTWVRRQPPKVKAFLAVVSGMTALVILRFIVHDHDNLFVAAEAVHSLGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTVLDLATFVTTVWVIYMIRFKLKASYMEEKDNFAIYYVVLPCAVLALVIHPSTSHHILNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDTRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4087 272 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 1 271 - -
Psa7g4087 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
Psa7g4087 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Psa7g4087 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Psa7g4087 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Psa7g4087 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Psa7g4087 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Psa7g4087 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4087 Psa-Chr7 335148599 335151413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4087 5 272 Miscellaneous Gene Families AT2G21190 88.806 1.62e-180 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4087 - - gmx:100775613 525.783