Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4079 ATGGTTCCGCCGGCGACACCATCGCCGAACCCCCAAGAAACCCAACAATTCCTCAGCTCCGTCCTCTCCCAGCGCGGTCCATCCGCAGTACCATACTCCGAAGACACGAAATGGCTCATCCGTCAACACTTGATCTCTCTCCTAACAACTTTCCCTTCTCTTGAACCCAAAACCGCTACCTTCACTCACAACGATGGCCGCACCGTTAATCTCCTCCAAGCCGATGGAACCATACCCATGACCTATCAATCTGTTACCTACAACATCCCCGTTGTTATCTGGCTCATGGAATCTTACCCTCGTCACCCACCTTGTGTCTATGTTAACCCTACCAGAGACATGGTTATCAAACGCCCTCACCCTCATGTTAATCCTTCTGGCCTTGTTTCTGTTCCTTATTTGCATAATTGGATCTACCCTAGTTCCAATTTGGTTGATCTTGTTCTCTCTTTGAGTCTTATCTTTGGTCGCGAACCTCCTCTTTATTCCCAACGTAGAGCTAGTAATAACAACCCTAATCCCAACCCCAATCCCCATCCCCATCCCCATCCTAACCCTAATCATAACCCTCATCCTAATTCAAGTTCTAATTTTGCAGCTGCTTCTTCATCTGGGTATCCTCTTCCTGCCAGGAATAACTACCCTCCTTCACCGTATTCGCCTTCTCCTTCTCCTCGGCCTCCTCATACGGAGGATCCTACTGAGGTTTTTAGGAGGAATGCTATTAACAAGCTTGTGGAGATGGTGCATAATGATGTTACATCATTGAGGAAGACTAGAGAAGCTGAAATGGAGGGTTTGTTTGGTTTGCAAGGGGTTTTGAAGCAGCGCGAGGAGGTTCTGGATAAAGGTGTGAAGGAAATGCGAGAGGAGATGGAGGGTTTGGAACAGCAACTTCAGATGGTTTTGATGAATACTGATGTTTTAGAGGGTTGGTTGAGGGATAATCAAGGGAAGAAGTTGGAGAGTTTGGAGAATGTTGAGGATGCTTTTGAGTGCGTGGATGTGCTTTCTAAACAGATGCTTGATTGTACTGCTGCTGATTTGGCTATTGAAGATACTCTTTATGCATTGGATAAGGGTGTTCAGGTTGGAGCTGTGCCGTTTGATCAGTACTTGAGGAGTGTGAGGGTGTTGTCGAGGGAACAATTCTTTCACCGGGCTACGGCTGCTAAAGTTAGAGCTGCTCAGTTGCAGGCTCAGGTTGCTAATATTGCTGCGAGGAGTCATCATTATGGTAGCTGA 1245 0.4699 MVPPATPSPNPQETQQFLSSVLSQRGPSAVPYSEDTKWLIRQHLISLLTTFPSLEPKTATFTHNDGRTVNLLQADGTIPMTYQSVTYNIPVVIWLMESYPRHPPCVYVNPTRDMVIKRPHPHVNPSGLVSVPYLHNWIYPSSNLVDLVLSLSLIFGREPPLYSQRRASNNNPNPNPNPHPHPHPNPNHNPHPNSSSNFAAASSSGYPLPARNNYPPSPYSPSPSPRPPHTEDPTEVFRRNAINKLVEMVHNDVTSLRKTREAEMEGLFGLQGVLKQREEVLDKGVKEMREEMEGLEQQLQMVLMNTDVLEGWLRDNQGKKLESLENVEDAFECVDVLSKQMLDCTAADLAIEDTLYALDKGVQVGAVPFDQYLRSVRVLSREQFFHRATAAKVRAAQLQAQVANIAARSHHYGS* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4079 414 Pfam UEV domain 41 161 IPR008883 GO:0015031|GO:0036211
Psa7g4079 414 Gene3D Ubiquitin Conjugating Enzyme 6 163 IPR016135 -
Psa7g4079 414 ProSiteProfiles Steadiness box (SB) domain profile. 335 403 IPR017916 -
Psa7g4079 414 SUPERFAMILY UBC-like 24 161 IPR016135 -
Psa7g4079 414 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 8 182 - -
Psa7g4079 414 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 183 412 - -
Psa7g4079 414 PANTHER PROTEIN ELC-LIKE 183 412 - -
Psa7g4079 414 PANTHER PROTEIN ELC-LIKE 8 182 - -
Psa7g4079 414 Coils Coil 278 305 - -
Psa7g4079 414 Gene3D - 336 396 - -
Psa7g4079 414 SUPERFAMILY Endosomal sorting complex assembly domain 335 395 IPR037202 -
Psa7g4079 414 Pfam Vps23 core domain 330 392 IPR017916 -
Psa7g4079 414 ProSiteProfiles UEV domain profile. 21 165 IPR008883 GO:0015031|GO:0036211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4079 K12183 - gmx:100798165 578.17