Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4048 ATGTCTTCACCTCTCAAACTTCTTTGTATTTCCTTCCTTTCCATCATCACTATTGTTTCTGCTGGCATCCCTGTAGGCCCGAAAGCGGTCACTTACGACGGCCGCTCGCTCATGATCAATGGAAAAAGAGAGCTTTTTTTCTCCGGTTCCATTCATTATCCACGAAGTGTCCCAGAAGAGTGGCCAATGATTCTTGATAGGGCAAAACATGGAGGGTTAAACTTAATCCAAACATACGTCTTTTGGAATGCTCATGAGTTTGAGAAAGGCGATTTGAACTTTGAAGGCAGGTATGATTTGGTAAAATTCCTTAAACTTGTACAAGAGAAAGGAATGTATGCTACCCTTAGAGTCGGCCCTTTCATCCAAGCCGAATGGAATCACGGAGGACTTCCATATTGGCTACGAGAGGTCCCCGACATCATATTCCGTTCGAACAATGAACCTTTTAAGGCACACATGAAAGAATATGTATCAACCGTTATAGAAAAAATGAAACAAGAAAAACTCTTTGCTCCTCAAGGAGGCCCTATCATTTTGGCACAGATTGAGAATGAGTACAATCATATCCAACTTGCTTATGAAACTGATGGAGATAGTTATGTTCAATGGGCTGCAAAATTGGCAGTTTCACTATATAACGAAGTTCCATGGATCATGTGCAAGCAAAAGGATGCTCCTGATCCAGTTATTAATGCTTGCAATGGAAGGCACTGCGGTGATACCTTCACAGGTCCAAACAAACCATACAAACCATCCATTTGGACTGAAAACTGGACTGCTCAGTATAGAGTATTTGGAGATCCACCGTCTCAAAGATCTGCGGAAGACATTGCCTTCTCAGTTGCTCGCTTCTTCTCTAAGAATGGATCTTTAGTCAACTACTATATGTATCATGGTGGAACAAATTTTGGTAGAACAACCTCAGCCTTTACAACAACATGTTATTACGACGAAGCTCCTCTTGATTCCTATGGTCTGCAAAGAGAACCAAAGTGGAGTCACCTAAGGGATGTTCACAAGGCTGTGAACCTATGTAAGAAGGCTCTACTCAATGGTGAACATACCACACAAAAACTTAGCCAGTATCACGAGATTATAGTCTATGAAAAGAAAGAAAGTAACTTATGTGCTGCTTTTATCACTAACAACCACACTCAAAATCCGAAAGTAATAGAATTCAGAGGTTCGAGCTACTATCTACCTCCGCGTTCCATCAGCATTCTTCCTGATTGTAAAACTATGGTCTTCAACACTCAAAATATTGCTTCGCAACACAACTCAAGAAACTTCGAGAAATCAAAGGTTGCAAACAATCACAAGTGGGAAGTGTATACTGAGCCTATTCCAACCAGCAAGGAATTGCCACCAAAACAAAAAATTCCTGCTGAGCTTTACAGCTTGCTTAAGGACACCACTGATTATGGATGGTACATCACTAGTGTGGAGTTGGGTCCAGAAGACTTACCAAAGAAGAATGAGATATCACCGGTTATTCGTATTTTGAGTCTTGGCCATTCATTACTTGCTTTTGTAAATGGACAATATGTTGGATCTAATCATGGTAGCCATGAAGAGAAAGGCTTTGAATTCCAGAAACCTGTAAGCTTCAAAGTTGGAGTCAACCACATAGCTATATTGGCTTCTTTAGTAGGACTACCTGATAGTGGAGCATACATGGAGCACAGGTATGCGGGACCTAAGACTGTAACCATCCTTGGTTTGAACTCTGGAACAATTACTCTCACTGCTAATGGTTGGGGTCACCAGGTTGGTCTCCAAGGCGAGAAATATGAAATTTTCACCGAGGTGGGATCAAAGAAAGTAGAGTGGAAAGATGCCAAGGGACATAATGCACCTCTCTCTTGGTACAAGACAAATTTTGCAACTCCAGAGGGAACATGCCCGGTTGCTATCAAAATGACTGGTATGGGGAAAGGAATGATTTGGATCAATGGCGAAAGCATCGGTCGTCACTGGATGAGCTATCTCTCTCCGCTCGGAAAGCCTACTCAATCAGAGTACCACATTCCAAGATCATTCCTTAAACCAAAAGACAACATGCTTGTTATATTGGAGGAAGAGATAGCGCATCCAGAAAACGTCGAGATAGTAAGGGTCAACAGAGATACAATATGCAGTTACATCACAGAGAATCACCCTCCCAATATCAAGTCATGGTCAAGTAAGAACCAAAAACTCACACCTGTTGCGGCGAATCTGACTCCAGCAGCTGTGATCAAGTGTCCAAACCAAAAAGCCATTAAGGCTATCGAGTTCGCAAGCTTTGGCGACCCTTTAGGTTTCTGTGGAGAGTTTATCATGGGAAAATGTCATGCACCTTCCTCCAAGAAGATTGTTGAGCAATATTGCTTAGGAAAAGGATCTTGCTCGGTTCCGATGGACAAAGCACTCTTCAACAGTGGTAAGGATGATTGCCCGAATGCGATAAAGACACTAGCAGTCCAAGCCAAGTGTGGTCCCTCCAATGATGAGAAGGATCTGGAGAATGAGAAGGATGAGGTTGATGAGATAGATTCGAGTTAG 2547 0.4232 MSSPLKLLCISFLSIITIVSAGIPVGPKAVTYDGRSLMINGKRELFFSGSIHYPRSVPEEWPMILDRAKHGGLNLIQTYVFWNAHEFEKGDLNFEGRYDLVKFLKLVQEKGMYATLRVGPFIQAEWNHGGLPYWLREVPDIIFRSNNEPFKAHMKEYVSTVIEKMKQEKLFAPQGGPIILAQIENEYNHIQLAYETDGDSYVQWAAKLAVSLYNEVPWIMCKQKDAPDPVINACNGRHCGDTFTGPNKPYKPSIWTENWTAQYRVFGDPPSQRSAEDIAFSVARFFSKNGSLVNYYMYHGGTNFGRTTSAFTTTCYYDEAPLDSYGLQREPKWSHLRDVHKAVNLCKKALLNGEHTTQKLSQYHEIIVYEKKESNLCAAFITNNHTQNPKVIEFRGSSYYLPPRSISILPDCKTMVFNTQNIASQHNSRNFEKSKVANNHKWEVYTEPIPTSKELPPKQKIPAELYSLLKDTTDYGWYITSVELGPEDLPKKNEISPVIRILSLGHSLLAFVNGQYVGSNHGSHEEKGFEFQKPVSFKVGVNHIAILASLVGLPDSGAYMEHRYAGPKTVTILGLNSGTITLTANGWGHQVGLQGEKYEIFTEVGSKKVEWKDAKGHNAPLSWYKTNFATPEGTCPVAIKMTGMGKGMIWINGESIGRHWMSYLSPLGKPTQSEYHIPRSFLKPKDNMLVILEEEIAHPENVEIVRVNRDTICSYITENHPPNIKSWSSKNQKLTPVAANLTPAAVIKCPNQKAIKAIEFASFGDPLGFCGEFIMGKCHAPSSKKIVEQYCLGKGSCSVPMDKALFNSGKDDCPNAIKTLAVQAKCGPSNDEKDLENEKDEVDEIDSS* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4048 848 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Psa7g4048 848 ProSiteProfiles SUEL-type lectin domain profile. 739 827 IPR000922 GO:0030246
Psa7g4048 848 SUPERFAMILY (Trans)glycosidases 28 346 IPR017853 -
Psa7g4048 848 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Psa7g4048 848 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Psa7g4048 848 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Psa7g4048 848 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Psa7g4048 848 PRINTS Glycosyl hydrolase family 35 signature 254 269 IPR001944 GO:0004553|GO:0005975
Psa7g4048 848 PRINTS Glycosyl hydrolase family 35 signature 291 306 IPR001944 GO:0004553|GO:0005975
Psa7g4048 848 PRINTS Glycosyl hydrolase family 35 signature 310 326 IPR001944 GO:0004553|GO:0005975
Psa7g4048 848 PRINTS Glycosyl hydrolase family 35 signature 619 633 IPR001944 GO:0004553|GO:0005975
Psa7g4048 848 PRINTS Glycosyl hydrolase family 35 signature 646 662 IPR001944 GO:0004553|GO:0005975
Psa7g4048 848 Gene3D Glycosidases 27 346 - -
Psa7g4048 848 PANTHER BETA-GALACTOSIDASE RELATED 13 823 IPR001944 GO:0004553|GO:0005975
Psa7g4048 848 SUPERFAMILY Galactose-binding domain-like 584 732 IPR008979 -
Psa7g4048 848 SUPERFAMILY Galactose-binding domain-like 406 572 IPR008979 -
Psa7g4048 848 Pfam Galactose binding lectin domain 747 826 IPR000922 GO:0030246
Psa7g4048 848 Pfam Glycosyl hydrolases family 35 36 342 IPR031330 -
Psa7g4048 848 Gene3D - 590 716 - -
Psa7g4048 848 Pfam Beta-sandwich domain in beta galactosidase 350 422 IPR041392 -
Psa7g4048 848 Gene3D - 356 566 - -
Psa7g4048 848 MobiDBLite consensus disorder prediction 828 848 - -
Psa7g4048 848 Gene3D - 735 833 IPR043159 -
Psa7g4048 848 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 13 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4048 Psa-Chr7 333209371 333213950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4048 30 827 Glycoside Hydrolase AT2G16730 60.474 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4048 - - gmx:102663614 1328.92