Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4016 ATGGGATCTCAGGTCTCTAAACAAATCGAAAAACGACAGGCAATTCATGCAGAAGAGAAAACTCTTTCTGATCTAAAAAGCTTAGGAGAAAACTATCCTGGTTCTGATTACTACCCTTCAGACAGAAAAAACTGGATGTCAAATCTCAACCATCACAAACTCAAAATCAACATGATTGTTTGGCCAGGAACACATGATTCCGCAACGAACAAAATCGGTATACCGGGAATTACTCGGCCTTTCGCGCAATGCCAAACCTTGTCCATCTACAATCAGCTTGTGAGAGGAACAAGAGTGTTTGACATTCGAGTGCAAGAGAATCAAAGAGTATGTCATGGAATTATCGTAACATACAGCATAGACATTGTCATTAGAGACGTAAAAAAGTTCTTATCAGAAACCGAATCCGAAATCATAATCCTCGAGGTTAGAACCGAGTTTGGACATAATGATCCACCTGAATTCGACAAGTATCTCGATGAAAACCTAGGCGAGTACTTAATTCACCAAGACGATGCTGTTTTTGATAAAACTATTGCCGAGGTGCTACCAAAAAGAGTTATATGCGTTTGGAAGCCGAGAAAATCGACACAACCAAAGGCGGGTAGTAGTCTTTGGAGTGCAGGCTATCTAAGGGATAATTGGATCAACACAGATTTGCCGTTGACAAAGTTTGAAAGTAATATGAAGTATTTGAGCGAACAGGAACGTGTCGTGTCTAGAAAATACTTCTATCGAGTTGAGAATACTGTTACACCGGTTCCTGATAACCCGATTGTGTGCGTGAAACCCGTGACAGAACGCATTCATGGATATGCAAGACTCTTTATTAGTCAGTGCTTTTCTAAAGGGTGTGGTGATAGATTTCAGATATTTTCTACAGATTTTATAGACTTGGATTTTGTTGATGCATGTGTTGGACTCACCCATGCAAGGGTTGAGGGTAAAGCATGA 954 0.4036 MGSQVSKQIEKRQAIHAEEKTLSDLKSLGENYPGSDYYPSDRKNWMSNLNHHKLKINMIVWPGTHDSATNKIGIPGITRPFAQCQTLSIYNQLVRGTRVFDIRVQENQRVCHGIIVTYSIDIVIRDVKKFLSETESEIIILEVRTEFGHNDPPEFDKYLDENLGEYLIHQDDAVFDKTIAEVLPKRVICVWKPRKSTQPKAGSSLWSAGYLRDNWINTDLPLTKFESNMKYLSEQERVVSRKYFYRVENTVTPVPDNPIVCVKPVTERIHGYARLFISQCFSKGCGDRFQIFSTDFIDLDFVDACVGLTHARVEGKA* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4016 317 PANTHER 1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE-LIKE PROTEIN 7 314 - -
Psa7g4016 317 Pfam Phosphatidylinositol-specific phospholipase C, X domain 81 173 IPR000909 -
Psa7g4016 317 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 56 184 - -
Psa7g4016 317 SUPERFAMILY PLC-like phosphodiesterases 41 308 IPR017946 GO:0006629|GO:0008081
Psa7g4016 317 SMART plcx_3 50 192 IPR000909 -
Psa7g4016 317 CDD PI-PLCXDc_plant 32 312 - -
Psa7g4016 317 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 309 IPR017946 GO:0006629|GO:0008081
Psa7g4016 317 PANTHER UNCHARACTERIZED 7 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4016 Psa-Chr7 331113681 331118168 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4016 1 317 Acyl Lipid Metabolism Gene Families AT4G38690 72.956 0.0 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4016 - - lja:Lj3g3v3500050.1 558.14