Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4013 ATGATTGACTCAAATCCACCACTCTTGAACCATTATGGAGCACTTTTGAGAAATTCAGATGAACCTCAAAACTCTAGAACTTTCAATGATCAAGATAGTAATGATACTGTGGTGGATACATGTGAACTACCATTGATAGACCTTAATGGTCTTAAAAGCTGTAATGTTAGAGAAAGAATGGCTTGCAGTGCAGCAATATGCAAGGCAGCATCAGAATGGGGATTTTTCCAAGTGATAAACCATGGTATAAACCCTGACCTACTAAGAAATATGAGGGAGGAGCAAATGAAGCTGTTTAGGGTACCCTTTGAGAAGAAGGTCAGTTGTGGACTTCTAAACAATCCATACAGGTGGGGGACACCAACAGCAACTAGTTCAAATCACTTTTCATGGTCAGAAGCTTTCCACATTCCTCTCACCATGATTTCAGAAGCAGCTTGCTGGGGTGAATTCAGTTCTCTAAGAGAAGCAATAAATGAGTTTGCACCAGCTATGCTAGAAGTGTCCAGGCTACTGGCAGGTATTCTAGCAGAAAACTTGGGCCACCCGACAGACGCAGTTGAAAAACTCTGTGATGCAAGCACATGCTTTCTGAGATTGAATCATTATCCTTCCTGCCCAAAATCTAAAGAAGAAATTTTTGGATTAGTACCTCACACTGACAGTGATTTCCTCACAATCCTTTATCAAGATCAGGTCGGTGGACTCCAACTGATGAAAGATTCCAAATGGGTCGCTGTAAAACCAAATCCAGATGCTCTTATTGTTAACATTGGAGATCTTTTCCAGGCCTGGAGTAATGATGAGTACAAAAGTGTAGAGCACAAGGTTGTAGCAAATGACAAAGTGGAAAGGTACTCCATTGCATACTTCCTATGTCCTTCTTACACTACTATGATAAGTGGCTGCAAGGAACCTTCGACATATAGGAATTTTACCTTTGGAGAATATCGACACCAAATTCAAGAAGATGTCAAGAAAATAGGACACAAAATAGGACTATCAAAATTTCTACGTAAAGGCACGTACACAACGACCACTGTTTAG 1047 0.405 MIDSNPPLLNHYGALLRNSDEPQNSRTFNDQDSNDTVVDTCELPLIDLNGLKSCNVRERMACSAAICKAASEWGFFQVINHGINPDLLRNMREEQMKLFRVPFEKKVSCGLLNNPYRWGTPTATSSNHFSWSEAFHIPLTMISEAACWGEFSSLREAINEFAPAMLEVSRLLAGILAENLGHPTDAVEKLCDASTCFLRLNHYPSCPKSKEEIFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVKPNPDALIVNIGDLFQAWSNDEYKSVEHKVVANDKVERYSIAYFLCPSYTTMISGCKEPSTYRNFTFGEYRHQIQEDVKKIGHKIGLSKFLRKGTYTTTTV* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4013 348 PANTHER OS02G0630300 PROTEIN 27 331 - -
Psa7g4013 348 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 27 331 - -
Psa7g4013 348 Gene3D - 15 327 IPR027443 -
Psa7g4013 348 Pfam non-haem dioxygenase in morphine synthesis N-terminal 43 137 IPR026992 -
Psa7g4013 348 Pfam 2OG-Fe(II) oxygenase superfamily 197 294 IPR044861 -
Psa7g4013 348 SUPERFAMILY Clavaminate synthase-like 36 322 - -
Psa7g4013 348 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 192 294 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4013 Psa-Chr7 331053471 331056720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4013 38 317 Glycosyltransferase AT5G59530 31.081 2.02e-38 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4013 - - gmx:100809329 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4013 7 331053471 331056720 Psa7g4013 7 331053471 331056720 ECH