Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4007 ATGGCAACAAGAACCAAACTTTCTGTTTGCATGATAGTGTTATTATTTGCAGCAACATTTAGAGTGTTAATCGTTAATGCAATAGATGAATGGTCCAATTTCGCAATCAATGAAGCAACCATAGAAGACATACAAAAAGCCTTCAACCGAAACGACCTCACTTCAAGACAACTCGTTGACTTTTACTTAAACCGAATCGAAACCCTCAATCCCGTACTTGGCGCTGTATTGGAAGTTAATCCGGACGCACGAGATCAAGCGGACAAAGCTGATTGTGAGAGACAAGAAAATCAGAACCGTTCATTGCTTCACGGGATACCTGTTTTGCTCAAAGACAGTATTGCCACCTTTGATAAACTCAACACTACAGCGGGTTCTTATGCATTGTTGGGATCGAAGGTTCCACGTGATGCACACGTGGTTTCTAAGCTAAGGGATGCTGGTGCCATCATTTTGGGAAAAACTAGTCTCTCTGAATGGTATGGGGTTCGTTCTAGTACTGCGCCAGAAGCTTGGTGCGCCAGAGGTGGATTTGCAATTAATCCTTATGTGGAAACCAAAAGTCCATGTGGGTCTAGCTTTGGATCTGCAGTTTCAGTGGCAACTAACATGGTTACAGTTTCACTAGGGACAGAAACGGATGGCTCTATTATCTGTCCGGCTGATCATAACTCGGTAGTCGGGATCAAGCCTACTGTTGGACTGACTAGCAGGGCTGGTGTCATACCAATTTCGCCTCGTCAAGATACTATTGGGCCAATATGCAGGACAGTTTCGGATGCAGTTCATGTGCTTGATGTAATTGTTGGGTTTGATCCAAGAGATTATGAAGCTACAAAGTCAGCGGCAAAGTTTATACCTTCAGGTGGTTATAAGCAATTCCTCAAGAAACAAGGGCTTAAAGGAAAGAAAATAGGTGTTTTGAGAAATCCATTTTTGATTCCTTATAAGGGATCCAAAGTCATTTCCATATTTGAGGATCATCTCATTGTATTGAGAGAAAGAGGTGCAACAGTTGTTGATAATTTGGAAGTAGAAAATTTAACGACCGTTCTTGATCCACTCCAAAGTGGTGAAATGATAACCTTACTTCCAGAATTCAAGTTGTCCATCAACAAATATCTGCAGGAGCTCATTTATTCTCCTGTGAGGTCTCTAGCTGAGATTATAGAATTCAACATCAACAACCCTATCTTAGAGAAGACTGATGAGTATGGGCAAGATTTCTTTATGGCATCAGAAATGACCAGTGGCTTTGGAAAAAGTGAAACTGAGGCAGTGAAAATGATGGACCAATTGTCGAAAAATGGGTTTGAGAGAGTGATAAAAGAAAATCAATTGGATGCATTGTTGGCCATAGGCTCCAATGTTTCTCCAATGTTTGCAATTGGAGGGTATCCTGCAATCACTGTCCCAGCTGGGTATGATAACCAAGGAATGCCATTTGGAATCTGTTTTGGAGGGTTAAAGGGAACTGAGCCGAAACTAATTGAGATTGCTTATGACTTTGAGCAATCTACCAATGCAAGGAAGCCACCCCCTCGCATTTCATTCACATGA 1560 0.4173 MATRTKLSVCMIVLLFAATFRVLIVNAIDEWSNFAINEATIEDIQKAFNRNDLTSRQLVDFYLNRIETLNPVLGAVLEVNPDARDQADKADCERQENQNRSLLHGIPVLLKDSIATFDKLNTTAGSYALLGSKVPRDAHVVSKLRDAGAIILGKTSLSEWYGVRSSTAPEAWCARGGFAINPYVETKSPCGSSFGSAVSVATNMVTVSLGTETDGSIICPADHNSVVGIKPTVGLTSRAGVIPISPRQDTIGPICRTVSDAVHVLDVIVGFDPRDYEATKSAAKFIPSGGYKQFLKKQGLKGKKIGVLRNPFLIPYKGSKVISIFEDHLIVLRERGATVVDNLEVENLTTVLDPLQSGEMITLLPEFKLSINKYLQELIYSPVRSLAEIIEFNINNPILEKTDEYGQDFFMASEMTSGFGKSETEAVKMMDQLSKNGFERVIKENQLDALLAIGSNVSPMFAIGGYPAITVPAGYDNQGMPFGICFGGLKGTEPKLIEIAYDFEQSTNARKPPPRISFT* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4007 519 Gene3D Amidase signature (AS) domain 24 514 IPR036928 -
Psa7g4007 519 PANTHER AMIDASE 18 515 - -
Psa7g4007 519 Pfam Amidase 58 496 IPR023631 -
Psa7g4007 519 PANTHER C869.01-LIKE PROTEIN, PUTATIVE-RELATED 18 515 - -
Psa7g4007 519 SUPERFAMILY Amidase signature (AS) enzymes 36 515 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4007 Psa-Chr7 330823757 330826673 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4007 53 282 Acyl Lipid Metabolism Gene Families AT5G07360 34.199 8.81e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4007 K01426 - qsu:112018080 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4007 7 330823757 330826673 Psa7g4007 7 330823757 330826673 ECH