Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4006 ATGGGAAGAACAACCATAGTTTCTATTTGTCTAGTGGTGTTAATTGCAGTAGCATTCAAAGGATTCATAGACAAACACCATGGAGTAGATGAATGGTCAGATTTTGTAATCAGCGAAGCAACAATTGAAGACATACAAAAGGCCTTCAACAGAAACCAACTCACTTCAAGAAAACTCGTTGACTTTTACTTAAACAGAATCCAGGCTCTCAATCCTGTACTTGGAGCCGTACTGGAAGTCAATCCGGACGCACGTGATCAAGCGGACAAGGCTGATTCTGAGAGAAAACAAGATCCGGACCGTTCATTGCTTCATGGGATCCCTGTTTTGCTTAAGGACGGTATTGCCACGTTGGACAAACTCAACAATACGGCTGGATCGTATGCGTTGTTCGGGTCGAAGGTTCCACGTGATGCGCACGTGGTTTCTAAGCTTAGGGATGCTGGTGCTATCATTCTTGGGAAAACTAGTCTTCCAGTGTGGTATGGGTTTCGCTCTTACAAAACGATAGGACAAGCTTGGTGCCCCAGAGGTGGATTTGCCTTGAACCCTTATGTGGAGTCTAAAAGTCCATGCGGGTCTAGTTTTGGATCTGCAATTTCAGTGGCAACAAACATGGTTGCAGTTTCTTTGGGGACAGAAACCGATGGCTCCATCATTTGTCCAGCTGACCACAACTCGGTAGTCGGGATCAAGCCCACTGTTGGACTCACTAGCAGGGATGGTGTCATACCAATTTCACCTCGTCAAGATACTGTTGGGCCAATATGCAGGAGAGTTTCAGATGCAGTTCATGTGCTTGATGTTATTGTTGGGTTTGACCCAAGAGATTACGAAGCTACAAAGTCCGCGGAAAAGTTTATACCTTCGGGTGGTTATAAGCAATTCCTCAATAAACAAGGGCTTAAAGGAAAGAAAATAGGTGTTTTGAGAAATCCATTTTTGATACCTTATAAGGGATCCAAAGTCATTTCTATCTTTGAGGATCTTCTCAATGATTTGAGAGAAAGAGGTGCAACATTGGTGGATAATTTAGAAGTAGAAAATTTAAGCATCATTCTGGACCCTTTCCAAAGTGGTGAAGTGACTATCTTACTTTCAGAGTTCAAGTTGTCCATCAACAAATATCTACAGGAGCTCACTTATTCTCCAGTGAGATCTCTAGCTGAGATTATAGAATTCAACATCAACAACACTATTTTAGAAAAAACTACTGAGTATGGGCAAGATTTATTTATTGCATCAGAAATGACTAATGGCTTAGGAACAAGTGAAATAATTGAGGCATTGAAGAAGATAGATCAATGGTCAAAAAATGGGTTTGAGAGTGATAAAAGAAAATCAATTGGATGCATTGTTGGCCATAGGCTCCAATGCTTCTCCAATGTTTGCAATTGGAGGGTATCCTGCAATCACTGTCCCAGCTGGGTATGA 1434 0.4184 MGRTTIVSICLVVLIAVAFKGFIDKHHGVDEWSDFVISEATIEDIQKAFNRNQLTSRKLVDFYLNRIQALNPVLGAVLEVNPDARDQADKADSERKQDPDRSLLHGIPVLLKDGIATLDKLNNTAGSYALFGSKVPRDAHVVSKLRDAGAIILGKTSLPVWYGFRSYKTIGQAWCPRGGFALNPYVESKSPCGSSFGSAISVATNMVAVSLGTETDGSIICPADHNSVVGIKPTVGLTSRDGVIPISPRQDTVGPICRRVSDAVHVLDVIVGFDPRDYEATKSAEKFIPSGGYKQFLNKQGLKGKKIGVLRNPFLIPYKGSKVISIFEDLLNDLRERGATLVDNLEVENLSIILDPFQSGEVTILLSEFKLSINKYLQELTYSPVRSLAEIIEFNINNTILEKTTEYGQDLFIASEMTNGLGTSEIIEALKKIDQWSKNGFESDKRKSIGCIVGHRLQCFSNVCNWRVSCNHCPSWV* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4006 477 PANTHER C869.01-LIKE PROTEIN, PUTATIVE-RELATED 29 443 - -
Psa7g4006 477 SUPERFAMILY Amidase signature (AS) enzymes 38 393 IPR036928 -
Psa7g4006 477 Pfam Amidase 59 402 IPR023631 -
Psa7g4006 477 PANTHER AMIDASE 29 443 - -
Psa7g4006 477 Gene3D Amidase signature (AS) domain 24 451 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4006 Psa-Chr7 330814613 330817268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4006 37 284 Acyl Lipid Metabolism Gene Families AT5G07360 32.932 5.68e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4006 K01426 - mnt:21407680 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4006 7 330814613 330817268 Psa7g4006 7 330814613 330817268 ECH