Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3998 ATGGCTTCCGCATCCTCCAAAACCCTAACCGATTTTTTCAACCGAGCTCCCAAACGCTTGAAACCAACTCTCACCACTATCTGCAAATCCGAAGATAACACCAATGCCTCCTCCACCCTCTCGATCGACCAAAAATTGCGCATCGAATACAATAAGAGCCTCGCTCTCTCCAAAAGAAACCTCAAAATCTGCACAGAAAGGGTTTCCAAACACAAAGAATCTTCAGTTGCGGGATGCGTGAAACTAGAAGAGTTGCTTGTGGAGGAGTCGTGGTTGGAGGCTTTATCTGGAGAATTTCAGAAATCATATGTGGTTAATCTTTCGAAATTTGTTGAAACGGAGATTTGTTCTGCTAGAGATGATTCTGTGTATCCTCCTCAGCATTTGATTTTCAATGCTCTTAACACTACTCCTTTTCATTCTGTTAAGGCTGTGATACTTGGCCAGGATCCTTATCATGGACCTGGTCAAGCAATGGGGCTTTCGTTCTCTGTACCCGAGGGAATCAAAGTTCCATCTAGTTTGGTAAATATATTTAAGGAGCTTAAGCAAGATCTTGGCTGTTCAATTCCATCTCAGGGTAATCTTGAAAAATGGGCTGTGCAGGGTGTTCTCTTACTCAATGCTGTTCTCACAGTCAGGAAACACCAAGCAAATTCTCATGCAAAAAAAGGCTGGGAACAATTTACTGACGCCGTTATCAAAACAATCTCGCAGAAGAAGGAAGGGGTTGTGTTTCTGTTGTGGGGAAAGTCTGCTCAGGAGAAACTTAGGTTAATTGATGTAACCAAGCATCACATTCTAAAAGCTGCACATCCTTCTGGTTTATCGGCACACAGAGGCTTCTTTGGCTGCAAGCACTTCTCTCAAACTAACCTGCATTTAAAGAAAATGGGGATAAGTCCCATAGATTGGCAGCTATAA 924 0.4286 MASASSKTLTDFFNRAPKRLKPTLTTICKSEDNTNASSTLSIDQKLRIEYNKSLALSKRNLKICTERVSKHKESSVAGCVKLEELLVEESWLEALSGEFQKSYVVNLSKFVETEICSARDDSVYPPQHLIFNALNTTPFHSVKAVILGQDPYHGPGQAMGLSFSVPEGIKVPSSLVNIFKELKQDLGCSIPSQGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKKEGVVFLLWGKSAQEKLRLIDVTKHHILKAAHPSGLSAHRGFFGCKHFSQTNLHLKKMGISPIDWQL* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3998 307 TIGRFAM ung: uracil-DNA glycosylase 89 298 IPR002043 GO:0004844|GO:0006281|GO:0006284
Psa7g3998 307 ProSitePatterns Uracil-DNA glycosylase signature. 143 152 IPR018085 GO:0006281|GO:0016799
Psa7g3998 307 Hamap Uracil-DNA glycosylase [ung]. 88 306 IPR002043 GO:0004844|GO:0006281|GO:0006284
Psa7g3998 307 SUPERFAMILY Uracil-DNA glycosylase-like 85 307 IPR036895 -
Psa7g3998 307 CDD UDG-F1-like 103 305 IPR002043 GO:0004844|GO:0006281|GO:0006284
Psa7g3998 307 Gene3D - 68 307 IPR036895 -
Psa7g3998 307 SMART UDG_2_a 135 295 - -
Psa7g3998 307 Pfam Uracil DNA glycosylase superfamily 139 292 IPR005122 -
Psa7g3998 307 PANTHER URACIL-DNA GLYCOSYLASE 5 307 IPR002043 GO:0004844|GO:0006281|GO:0006284
Psa7g3998 307 SMART UDG_2 135 295 IPR005122 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3998 K03648 - gmx:100818241 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3998 7 330497062 330500733 Psa7g3998 7 330497062 330500733 ECH