Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3987 ATGATTCTGGATAAGAAGCACATTGAGGAAACTTATTATGAGGTTCTCAATATCAAGGAGAATGCAAATTTCGGAGAGATTCGTGATAAACTCTTGAACACATCAAGCAGTAATCGAACAAGTGCAGAGAGATTTCTCAAAGTACACAAGGCATGGGAAACTCTAAGCTATTCAAAGTCTCGTTTATTTTACGACAAAGCGCTGCAGAGTTCAAGGCGGGAGGATTTATTGTCTTCCGAGGTTACAGAAGATTTAAGCTTACGTGATATGACAGCTGAAGACGCTGGCAAAACATTGGAACTGACAATGTTTTATCAATGTCGATGTGGTGATTACTTCTCTGTGGATTCGTTGGAATTGCAGAAAATGGGATATACATTGTTGAGAGATGGAAGCAGCTTATCTATACGCAATGTTGATACATTGCCAGGATCAGTGGTTCTTCCTTGTGGAACGTGTTTGATGAAAGCTCGTCTGGTTCTCAGTAAGGATGATAGTTGA 501 0.3992 MILDKKHIEETYYEVLNIKENANFGEIRDKLLNTSSSNRTSAERFLKVHKAWETLSYSKSRLFYDKALQSSRREDLLSSEVTEDLSLRDMTAEDAGKTLELTMFYQCRCGDYFSVDSLELQKMGYTLLRDGSSLSIRNVDTLPGSVVLPCGTCLMKARLVLSKDDS* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3987 166 CDD DnaJ 11 56 IPR001623 -
Psa7g3987 166 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 4 1 163 - -
Psa7g3987 166 SUPERFAMILY Chaperone J-domain 10 68 IPR036869 -
Psa7g3987 166 Gene3D DnaJ domain 5 79 IPR036869 -
Psa7g3987 166 Pfam CSL zinc finger 85 159 IPR007872 -
Psa7g3987 166 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 81 162 IPR007872 -
Psa7g3987 166 PANTHER DPH3 HOMOLOG-RELATED 1 163 IPR044248 GO:0017183|GO:0046872
Psa7g3987 166 SUPERFAMILY CSL zinc finger 82 164 IPR036671 -
Psa7g3987 166 Gene3D DPH Zinc finger 80 166 IPR036671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3987 Psa-Chr7 329954899 329955399 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3987 K17867 - gmx:100814856 208.764