Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3983 ATGAGAAAAGGTTTCAGTTTCTTCATTTCTCTTTGTAGCCGTAACCATCTATTACCGCCGCCACCACCACCCTCACTCCCCTCTCCCGGCGTCTCCTTCTTCTCCAGATCTCATCTCTCCACCGCCTCCGCTGCCATGCCAGGTGCTGACTCACTCGATATCGAATGGCCGGCCAAGCGCGTCAGAGACACCTTCGTCAAGTTCTTCGAAGATAAGAACCATGTCTATTGGAAGTCCAGTCCCGTCGTCCCTTTCAATGATCCTACTCTCCTCTTTGCTAACGCCGGGATGAACCAATACAAGCCAATTTTTTTGGGAACTGTTGATCCTAACACTGCCTTGAGCAAACTCTCTCGGGCGTGCAATACCCAGAAGTGCATTCGAGCTGGTGGTAAGCATAATGATCTTGACGACGTGGGGAAAGACACTTACCATCACACTTTCTTTGAGATGTTGGGAAATTGGTCGTTTGGCGATTACTTTAAAGAAGAAGCCATTAGCTGGGCATGGGAACTTCTAACCAAAGTTTATAAATTACCTTCAGATCGCATTTATGCTACATATTTTGGTGGTGATGAGAAGGCTGGACTTGCCCCCGATACCCAGGCTAGAGATATATGGTTGACGTTTTTGCCTCCTGGACGAGTGCTTCCTTTTGGCTGTAAAGACAATTTCTGGGAGATGGGTGACACTGGTCCTTGTGGGCCTTGCACTGAAATACATTTTGACAGAATAGGTAACCGTGATGCTGCGGATTTGGTTAATAATGATGATCCTACCTGCATTGAGATATGGAACCTCGTCTTTATCCAGTTCAATAGGGAGGCTGATGGCTCTCTTAAATCCCTGCCTGCAAAGCATGTTGACACTGGGATGGGTTTTGAACGACTGACCTCTATTCTACAGAACAAAATGAGCAATTATGACACTGATGTCTTCATGCCTATTTTCGATGCTATTCAGCTGGCAACTGGTGCTCACCCATATTCCGGGAAAGTCGGACCTGAGGATGCTGATAAAGTAGACATGGCATACAGGGTTGTTGCAGATCACATTAGGACTCTGTCATTTGCCATTGCTGACGGGTCCCGTCCTGGTAATGAAGGTCGCGAGTATGTTCTGAGGCGTATACTTCGTCGAGCTGTTCGGTATGGGCGTGAAGTGCTAAAAGCTGAGGAGGGTTTTTTCAATGGGCTTGTAAATGTTGTGGCAAATGTACTGGGTGATGTTTTCCCTGAGCTAAAACAACAGGAAGTGCACATTAGAAATGTGATTCAAGAGGAAGAGGAAAGTTTTGGCAGAACCTTAGTTAAGGGCATTGCAAAATTTAAGACTGCTGTTCAACACGTCCAGGGAAACACACTGAGCGGGGAGGTAGCGTTTGAGTTGTGGGATACATTCGGGTTCCCATTAGATCTGACACAGCTTATGGCTGAAGAGAAAAAATTACAAGTTGACGTCGAAGGTTTTAATAGTGCTATGGAAGCTGCAAGAGAAAGGTCAAGAAGTGCTCAAAATAAGCAAGCTGGTGGTGCTATTGTCATGGATGCTGATGCTACATCAGCATTGCACAAGAGAAGCATTGCTCCAACAGATGACAGTTTCAAATTTGTTTGGTTCAAGGACCATGAAAGTGTGGTAAAAGCAATATATACCGGTTCTGAGTTTGTTGATTCTGTTAATACTGATGGTGATGTTGGTGTGATTCTGGAATCTACAAGCTTCTATGCTGAGCAAGGTGGTCAGATTTTCGATACTGGGTCACTTGATTTCCAACATGTTTCATATCAAGTTCATAATGTTCAAGTTTACGGAGGTTATGTGCTTCACATTGGTAATGGGGCTGGTATATCTGTTGGAGACAAAGTAGTATGCAAGGTTGATTACGGAAGACGTTCGCTTATAGCCCCTAACCATACATGCACACACATGTTAAATTTTGCTCTTAGGGAAGTACTTGGTAATCATGTCGACCAGAAAGGATCTATCGTTCTTCCTGAAAAGTTGAGATATGATTTTTCTCACGGCAAGCCTGTCGATGCTGATTCTTTAAGGAGAATTGAGTCAATTGTTAACGAACAAATTAAAGCTGAATTGGATGTAAATGCAAAGGAGGTAACTCTTGCCGATGCCAAGCGCATTAATGGTCTACGAGCTGTTTTTGGAGAAGTCTATCCTGATCCAGTTAGAGTTGTGTCAGTTGGACAAAAAGTTGAAGATCTGCTTGCTGACCCTGAGAACGAAAAATGGTTATCTATTTCATCTGAATTGTGTGGCGGCACCCATATTTCAAATACACGAGAGGCTAAAGCTTTTGCGCTTTTAGCTGAGGAGGGAATTGCTAAAGGGATCCGTAGAATAACAGCTGTCACAACTGATCGTGCTTCTGATGCAATGAAACTGGCAGATGAATTTGAGCAGCAAGTAGATGAAGCGGCTAAGCTGGAAGGAAGTTTTCTGGAAGAGAAAGTTTCAGCTCTGAAAAGCAGCGTGGAAACATTATCAATTCCTGCAGCTAAGAAAGCTGAAATCAAGACCAAGATTGCCCTACTTCAGGATCAAGTGAGGAAAGCGCAGAAGCGTGTCGCTGAAGAAAACAAACGCAAAGCTGTATTATTAACGTCTGAGAAGGCTGATCTAGCGGTTTCAGATGGGAAATCTTTTTGCATATCTCACGTTAATGTTGGCCTGGATGTTGCAGCAGTTCGTGAGGCTGTTACAAAAGTCATTGATCAGAAGGGGTTGTCAGTGATGGTTTTTAGCACTGATGAATCTACAAACAAGGCTGTAGTTTGTGCTGGGGTGCCGGAGAAAGGAGATAAAGGAAAGCTGGATGTATCAGAGTGGTTGACTAATGCTTTGGGGCCACTGAAAGGGAGATGTGGTAAAGGAAAGGGAGGTCTTGCAACAGGACAGGGCACCGATGCAGCACAAGTAAACGAGGCTATGGATCTTGCAGTGAAGTTTGCATCTGTGAAATTAACTTAA 2988 0.4431 MRKGFSFFISLCSRNHLLPPPPPPSLPSPGVSFFSRSHLSTASAAMPGADSLDIEWPAKRVRDTFVKFFEDKNHVYWKSSPVVPFNDPTLLFANAGMNQYKPIFLGTVDPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAISWAWELLTKVYKLPSDRIYATYFGGDEKAGLAPDTQARDIWLTFLPPGRVLPFGCKDNFWEMGDTGPCGPCTEIHFDRIGNRDAADLVNNDDPTCIEIWNLVFIQFNREADGSLKSLPAKHVDTGMGFERLTSILQNKMSNYDTDVFMPIFDAIQLATGAHPYSGKVGPEDADKVDMAYRVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGREVLKAEEGFFNGLVNVVANVLGDVFPELKQQEVHIRNVIQEEEESFGRTLVKGIAKFKTAVQHVQGNTLSGEVAFELWDTFGFPLDLTQLMAEEKKLQVDVEGFNSAMEAARERSRSAQNKQAGGAIVMDADATSALHKRSIAPTDDSFKFVWFKDHESVVKAIYTGSEFVDSVNTDGDVGVILESTSFYAEQGGQIFDTGSLDFQHVSYQVHNVQVYGGYVLHIGNGAGISVGDKVVCKVDYGRRSLIAPNHTCTHMLNFALREVLGNHVDQKGSIVLPEKLRYDFSHGKPVDADSLRRIESIVNEQIKAELDVNAKEVTLADAKRINGLRAVFGEVYPDPVRVVSVGQKVEDLLADPENEKWLSISSELCGGTHISNTREAKAFALLAEEGIAKGIRRITAVTTDRASDAMKLADEFEQQVDEAAKLEGSFLEEKVSALKSSVETLSIPAAKKAEIKTKIALLQDQVRKAQKRVAEENKRKAVLLTSEKADLAVSDGKSFCISHVNVGLDVAAVREAVTKVIDQKGLSVMVFSTDESTNKAVVCAGVPEKGDKGKLDVSEWLTNALGPLKGRCGKGKGGLATGQGTDAAQVNEAMDLAVKFASVKLT* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3983 995 PANTHER BNACNNG61840D PROTEIN 32 994 - -
Psa7g3983 995 CDD AlaRS_core 58 304 - -
Psa7g3983 995 SMART tRNA_SAD_4 729 788 IPR012947 GO:0004812|GO:0005524|GO:0043039
Psa7g3983 995 Coils Coil 841 868 - -
Psa7g3983 995 Hamap Alanine--tRNA ligase [alaS]. 56 994 IPR023033 GO:0004813
Psa7g3983 995 Gene3D - 628 804 - -
Psa7g3983 995 Pfam DHHA1 domain 853 989 IPR003156 GO:0003676
Psa7g3983 995 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 729 787 IPR012947 GO:0004812|GO:0005524|GO:0043039
Psa7g3983 995 TIGRFAM alaS: alanine--tRNA ligase 61 972 IPR002318 GO:0000166|GO:0005737
Psa7g3983 995 SUPERFAMILY Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 309 510 IPR018162 GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419
Psa7g3983 995 Gene3D - 537 627 - -
Psa7g3983 995 Coils Coil 795 815 - -
Psa7g3983 995 Gene3D - 884 990 - -
Psa7g3983 995 SUPERFAMILY Translation proteins 555 627 IPR009000 -
Psa7g3983 995 PANTHER ALANYL-TRNA SYNTHETASE 32 994 - -
Psa7g3983 995 SUPERFAMILY Class II aaRS and biotin synthetases 58 308 IPR045864 -
Psa7g3983 995 Gene3D Bira Bifunctional Protein; Domain 2 57 305 IPR045864 -
Psa7g3983 995 SUPERFAMILY ThrRS/AlaRS common domain 627 806 IPR018163 GO:0000166
Psa7g3983 995 Coils Coil 487 507 - -
Psa7g3983 995 ProSiteProfiles Alanyl-transfer RNA synthetases family profile. 56 801 IPR018165 GO:0003676|GO:0004813|GO:0005524|GO:0006419
Psa7g3983 995 Pfam tRNA synthetases class II (A) 61 629 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
Psa7g3983 995 PRINTS Alanyl-tRNA synthetase signature 134 145 IPR002318 GO:0000166|GO:0005737
Psa7g3983 995 PRINTS Alanyl-tRNA synthetase signature 262 273 IPR002318 GO:0000166|GO:0005737
Psa7g3983 995 PRINTS Alanyl-tRNA synthetase signature 289 302 IPR002318 GO:0000166|GO:0005737
Psa7g3983 995 PRINTS Alanyl-tRNA synthetase signature 346 362 IPR002318 GO:0000166|GO:0005737
Psa7g3983 995 PRINTS Alanyl-tRNA synthetase signature 370 383 IPR002318 GO:0000166|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3983 Psa-Chr7 329867871 329882208 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3983 K01872 - gmx:100788271 1645.17