Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3963 ATGTTTTGCTTGAGACCTATTTTGCGTTCACAACCAAGATCTTCGATATGGGTCTTACACCATTCTTCCTATGGATATTGCACTTCCTCCGCCGCTGCAATTCAAGCTGAGAAAACCATTCAACATGGACCCAGAAACGATTGGACTAAAGAAGAAGTCAAATCCATCTACGACTCTCCCATTCTCGATCTTCTCTTCCATGGGGCTCAGGTTCACAGACATGCTCATAACTTTAGGGAAGTGCAACAGTGTACTCTTCTATCTGTGAAAACAGGTGGGTGCAGTGAGGATTGTTCTTATTGTCCTCAATCCTCTAGATATGATACAGGGCTCAAAGGTCAAAGACTTATGAACAAAGAGGCTGTTCTTCAGGCTGCAGTCAAGGCAAAAGAGGCTGGGAGTACTCGCTTTTGTATGGGCGCTGCATGGCGGGATACAATAGGAAGAAAGACAAACTTCAACCAGATACTTGAATATGTAAAAGAAATAAAGGGAATGGGGATGGAGGTGTGTTGCACCCTTGGCATGCTGGATAAAGATCAAGCTGGCGAACTCAAGAAGGCGGGTCTTACTGCCTATAATCACAATCTTGACACTTCCAGGGAATACTACCCAAACATCATCACAACAAGGAGTTATGATGAGCGCCTTCAAACACTTGAATATGTTCGTGATGCAGGGATTAATGTTTGCTCTGGAGGAATTATCGGGCTCGGAGAAGCTGAGGAAGACCGAGTAGGTTTGCTACATACATTATCAACACTTCCTACACATCCAGAGAGCGTTCCTATCAATGCACTTGTTGCTGTCAAGGGAACCCCTCTTCAGGATCAGAAGCCTGTTGAAATATGGGAGATGATTCGCATGATTGCGACAGCGCGTATAACAATGCCAAAAGCAATGGTGAGGTTATCGGCCGGGAGAGTTCGATTCTCCGTGCCTGAGCAGGCATTGTGTTTTCTTGCTGGTGCGAATTCTATCTTTGCTGGTGAAAAGCTTCTCACAACTGCCAACAATGATTTTGATACTGATAAACTCATGTTTAAAGTTCTGGGTCTTCTTCCAAAAGCTCCAACCTTAGACGAAGATGAAACTAGCGAGAGCGAGAACTATAAAGAAGCTGCTTCTTCTAGTTGA 1137 0.4442 MFCLRPILRSQPRSSIWVLHHSSYGYCTSSAAAIQAEKTIQHGPRNDWTKEEVKSIYDSPILDLLFHGAQVHRHAHNFREVQQCTLLSVKTGGCSEDCSYCPQSSRYDTGLKGQRLMNKEAVLQAAVKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKEIKGMGMEVCCTLGMLDKDQAGELKKAGLTAYNHNLDTSREYYPNIITTRSYDERLQTLEYVRDAGINVCSGGIIGLGEAEEDRVGLLHTLSTLPTHPESVPINALVAVKGTPLQDQKPVEIWEMIRMIATARITMPKAMVRLSAGRVRFSVPEQALCFLAGANSIFAGEKLLTTANNDFDTDKLMFKVLGLLPKAPTLDEDETSESENYKEAASSS* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3963 378 SFLD biotin synthase like 40 360 - -
Psa7g3963 378 SUPERFAMILY Radical SAM enzymes 46 355 - -
Psa7g3963 378 Gene3D Aldolase class I 45 357 IPR013785 -
Psa7g3963 378 PIRSF Biotin_synth 28 361 IPR024177 -
Psa7g3963 378 MobiDBLite consensus disorder prediction 359 378 - -
Psa7g3963 378 Hamap Biotin synthase [bioB]. 46 356 IPR002684 GO:0004076|GO:0009102
Psa7g3963 378 SFLD biotin synthase 40 360 IPR024177 -
Psa7g3963 378 SMART BATS_2 263 355 IPR010722 -
Psa7g3963 378 SMART MiaB 84 292 IPR006638 GO:0003824|GO:0051536
Psa7g3963 378 Pfam Biotin and Thiamin Synthesis associated domain 263 353 IPR010722 -
Psa7g3963 378 CDD Radical_SAM 91 291 - -
Psa7g3963 378 ProSiteProfiles Radical SAM core domain profile. 79 308 IPR007197 GO:0003824|GO:0051536
Psa7g3963 378 Pfam Radical SAM superfamily 90 249 IPR007197 GO:0003824|GO:0051536
Psa7g3963 378 PANTHER BIOTIN SYNTHASE 29 375 IPR002684 GO:0004076|GO:0009102
Psa7g3963 378 TIGRFAM bioB: biotin synthase 56 353 IPR002684 GO:0004076|GO:0009102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3963 K01012 - gmx:100808225 662.529