Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3955 ATGGATACACTTCAAGCAACATACAAAGACGAAGAAGATGAAGATGAAGACCTTCCACTCGCCACCACAACCGCACCCATCGCCGACCAACCCGCTGCCTCCGTCGCTACCGATATGGAATCAACATACGCACCTCTGATCACTTCAAGCACCCCTTCTGACACCCTTACCGAACCCCAAAACGATGGAAAATCGGAGCTCGATCCCTCTGATGATCCCTCCTCCGACGAAGCTGCATCAAACGGCTTGAATTCCCCGAAGCAGAGTAGAGGAGATGCCGATGAAGATGAAGAAGAACCGCCTCCGAAGAAGCAGAAACAACTGTCCTCTCTGGATATTGTCAAGGACGAATCGGTGTCATTGCCGGAGGAAAACAACGGGACAAGAAATGCTGTTGCGTCAACCGCAACGACATCGACGCCGGCAAACGGAACTGTGAAGAAATCGAAGAAAAAGAGCAACAATGTGTGGGCTACAAAATCAACAAGGAAAGGGAAAAAGAAAAGCAAAAACAACAACAATAAAAACAACAATAATAATAATAACACCAACAACAACACAAATGGTGGAGAAGACAGCGTTCTGGTAACACCGGTACCAAGGTTCCCGGATAAAACGGACGATACACCAGATATGAAGATATGTCTCTCAAAGATATACAAAGCGGAGAAAGTAGAGTTGAGTGAGGATAGGTTGAGTGCAGGGAGCACAAAGGGTTATAGAATGGTTAAGGCAACGAGAGGGGTAATTGAAGGAGCTTGGTACTTTGAGATAAAGGTTGTGAGGTTAGGGGAGACTGGACACACACGTTTAGGTTGGGCTATGGATAAGGGTGATTTGCAGGCACCTGTTGGGTATGACGGGAATAGTTTTGGGTATAGGGATATTGATGGGAGTAAGATTCATAAGGCTTTGAGGGAGAAATATGGCGATGTAGGTTACGGAGAAGGTGATGTTATTGGGTTCTATATTAATTTGCCTGATGGAGAGAAGTATGCGCCAAAAAACAAGCAGTTGGTTTGGTATAAAGGACAAAGATATGCATATGCTCAAGATGCTAAGGAAGATCCACCCAAAGTTGTGCCCGGTTAG 1092 0.457 MDTLQATYKDEEDEDEDLPLATTTAPIADQPAASVATDMESTYAPLITSSTPSDTLTEPQNDGKSELDPSDDPSSDEAASNGLNSPKQSRGDADEDEEEPPPKKQKQLSSLDIVKDESVSLPEENNGTRNAVASTATTSTPANGTVKKSKKKSNNVWATKSTRKGKKKSKNNNNKNNNNNNNTNNNTNGGEDSVLVTPVPRFPDKTDDTPDMKICLSKIYKAEKVELSEDRLSAGSTKGYRMVKATRGVIEGAWYFEIKVVRLGETGHTRLGWAMDKGDLQAPVGYDGNSFGYRDIDGSKIHKALREKYGDVGYGEGDVIGFYINLPDGEKYAPKNKQLVWYKGQRYAYAQDAKEDPPKVVPG* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3955 363 CDD SPRY_Ash2 225 327 - -
Psa7g3955 363 Coils Coil 166 186 - -
Psa7g3955 363 MobiDBLite consensus disorder prediction 121 160 - -
Psa7g3955 363 MobiDBLite consensus disorder prediction 172 193 - -
Psa7g3955 363 MobiDBLite consensus disorder prediction 89 111 - -
Psa7g3955 363 MobiDBLite consensus disorder prediction 1 193 - -
Psa7g3955 363 Pfam SPRY domain 254 330 IPR003877 GO:0005515
Psa7g3955 363 SMART SPRY_3 251 354 IPR003877 GO:0005515
Psa7g3955 363 SUPERFAMILY Concanavalin A-like lectins/glucanases 213 330 IPR013320 -
Psa7g3955 363 Gene3D - 212 358 IPR043136 -
Psa7g3955 363 MobiDBLite consensus disorder prediction 27 63 - -
Psa7g3955 363 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 16 363 IPR037353 GO:0048188|GO:0051568
Psa7g3955 363 ProSiteProfiles B30.2/SPRY domain profile. 194 363 IPR001870 -
Psa7g3955 363 MobiDBLite consensus disorder prediction 74 88 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3955 K14964 - gmx:100796715 437.187