Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3950 ATGGCTTCTGTTGTACCCATTCTCCATAACCTGCCATCTCTCTCCCATTCTCAACCTCTTTTTTCAAGATCCACCAACCACAAATCAAAATTCCTCATCCTTTCAAGAAAACCTAATAACTCACCAATATTACTTCTCAAATGTTCTTCTTCTTCTTCCTCTTCTTCCATGCTAAACAAACTAGAAGAAGATGAAGAAGACATATTAAAAGACGACGTCGGAGAACAAGAATTATCACCACAACCACCACAACCTCCACCGCCGCCGCCGCCGCTACCTCCGTTGAGCCAAGTATGGGAAGAAATCCAAGGTAAGAACAACTGGGAAGGCTTGTTAGATCCGATGGATCCCATTCTCCGGAAAGAAATCACTCGCTACGGCGAGTTTGCTCAAGCATGCTACGATTCCTTCGACTTTGATCCACACTCCAAATACTGTGGAACCTGCAAGTATCATCCTTCACATTTCTTCGAGAAACTAGACATGGCTGATAGTAGTGGATACACCATAACACGATATCTCTATGCAACTTCAAACATCAATCTTCCTAACTTTTTTCAGAAATCTAAGATCTCTTCTGTGTGGAGTACACATGCTAACTGGATGGGATACATCGCTGTCGCCACCGATGAAGAAGAAATTAAACGATTAGGACGCCGCGACATAGTTATTGCATGGAGGGGCACAGTAACATACATAGAATGGATATACGACCTAAAAGACATTCTACACGAAGCAAACTTCAGAAATGACCCAACAATCAAAGTAGAATTAGGCTTCTATGACTTATACACTAAGAAAGAAGATTCATGCAGTTATTGCACATTCTCAGCTCGAGAACAAGTCCTCTCAGAAGTGAAACGCCTTGTACAATACTACGAAGGAGAAGAACTCAGCATCACAATCACAGGACACAGTCTCGGCGCTGCATTAGCCATACTCAGCGCTTACGACATCGCCGAACTAAACCTAAACGTCGTCAAAGATAGTAATAATAACATAACGAAAGTCATCCCAGTAACCGTTTACTCGTTCGCAGGCCCTAGGGTTGGGAATTTGAAGTTCAAAGAAAGGTGCGATGAACTCGGTGTTAAGGTTTTGAGAATATTAAACGTGCATGACAAGGTTCCAACCGTGCCTGGGATAATAACTAATGAGAAATTTCAGTTTCAGAGGTATATAGAAGATGCTTTGTCTTTTCCGTGGAGTTATGCACATGTTGGAACTGAAATCGCTTTGGATCATAGAGAAAGTCCGTTTTTGAAGGAAAATGGTGATTTGGGTTGTGCACATAATTTAGAGGTACTTTTGCATTTAATAGATGGGTATCATGGGAAGAAGAAGAAATTTGATTTGGTTTCGCAAAGAGATATTGCGCTTGTGAATAAGAGCTGTGATTTTCTACGGAGTGAGTATGGTGTACCGCCGCATTGGAGACAAGATGAGAATAAAGGGATGGTGAGATCCGGTGATGGACGGTGGGTTTTGCCTGAACGGCCACAATTGGAAGCTCATCCACCGGATACAGCACAACTTCTTGAGTTAGTGCTTAAATATCACATTCTGATTAATGCTAAGTTTCAATCAGGAGCAAAGTGA 1599 0.4196 MASVVPILHNLPSLSHSQPLFSRSTNHKSKFLILSRKPNNSPILLLKCSSSSSSSSMLNKLEEDEEDILKDDVGEQELSPQPPQPPPPPPPLPPLSQVWEEIQGKNNWEGLLDPMDPILRKEITRYGEFAQACYDSFDFDPHSKYCGTCKYHPSHFFEKLDMADSSGYTITRYLYATSNINLPNFFQKSKISSVWSTHANWMGYIAVATDEEEIKRLGRRDIVIAWRGTVTYIEWIYDLKDILHEANFRNDPTIKVELGFYDLYTKKEDSCSYCTFSAREQVLSEVKRLVQYYEGEELSITITGHSLGAALAILSAYDIAELNLNVVKDSNNNITKVIPVTVYSFAGPRVGNLKFKERCDELGVKVLRILNVHDKVPTVPGIITNEKFQFQRYIEDALSFPWSYAHVGTEIALDHRESPFLKENGDLGCAHNLEVLLHLIDGYHGKKKKFDLVSQRDIALVNKSCDFLRSEYGVPPHWRQDENKGMVRSGDGRWVLPERPQLEAHPPDTAQLLELVLKYHILINAKFQSGAK* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3950 532 Gene3D alpha/beta hydrolase 98 508 IPR029058 -
Psa7g3950 532 PANTHER PHOSPHOLIPASE A1-IGAMMA3, CHLOROPLASTIC 28 517 - -
Psa7g3950 532 SUPERFAMILY alpha/beta-Hydrolases 123 444 IPR029058 -
Psa7g3950 532 Pfam Lipase (class 3) 223 382 IPR002921 GO:0006629
Psa7g3950 532 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 28 517 - -
Psa7g3950 532 CDD Lipase_3 173 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3950 Psa-Chr7 327664517 327668047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3950 95 517 Acyl Lipid Metabolism Gene Families AT1G51440 74.306 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3950 - - mtr:MTR_4g077070 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g3950 7 327664517 327668047 Psa7g3950 7 327664517 327668047 ECH