Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3900 ATGTCTACGTCTCTTTCTTTTGTTCGTCTCTCTTGTTCCTCGCATTCAATTTCACCCTCTTTTTCTCATCTTCCTCCCCAATTACCCAATTCTCGCGCCTCCCATTTTGTTTTCTGCCGCTACAGACGCAGACACGTTTCTGGTTCCTCCTCCATTAGCCGCGGCATTTTCAAAGTCTGTTCCTTTTCCACTCTCGGTGGAGCTTCTGAATTTGACAGTTTAAGCCAAAGGAGCCATGATGAAGAAGAAGATGATGAACAACAAATTAGGACTAGAGCTAATGACGAGGATGAAGTAGACGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATCTATTAGCTCTTATGTTTTTCCTGAAAGATGGGATGTCTTAGGTCTTGGACAAGCCATGGTAGACTTTTCTGGCACAATTGATGATGAGTTCTTGAAGAATTTAGGATTAGAAAAGGGAACAAGGAAACTTGTAAATCATGAGGAAAGAGGTAGAGTTTTGCAGGCCATGGATGGTTGCAGTTATAAAGCCGCCGCTGGTGGATCTCTTTCTAATACCTTAGTTGCCCTGGCAAGGCTTGGAGGCCGGTCCCTCCGAGATCCTGCTATAAATGTGGGAATGGCTGGGAGTGTCGCGAGTGATCTATTGGGTGGTTTCTACAGGGAAAAATTACGCCGAGCAAATGTGCAATTTCTGTCTGTGCCTATCAAGGATGCGACAACTGGAACAGTTATAGTTCTTACAACTCCAGATGCTCAACGCACAATGCTTGCATATCAGGGCACATCTTCAACCGTTAACTTTGACACTTCCTTGGCAAGTGCAGTTTCCAAGACGAACATACTTGTTGTTGAAGGGTATCTATTCGAACTTCCTGATACTATTAAAACAATAACAAAAGCATGTATGGAAGCTAGGAGTAATGGTGCTCTGGTTGCAGTAACAGCTTCAGATGTCTCCTGCATTGAGAGACATTTTGATCATTTCTGGGAGATCATAGGCAATTACGCAGATTTAATATTCGCTAACGTTGATGAGGCGAGAGCTCTTTGTAATTTTGATGCAAAGGAGAGTACTGTTTCTGTTACAAGATATCTAAGTCAGTTTGTCCCTCTAGTATCCGTTACGGACGGTATCAGAGGCTCTTACATAGGCGTAAAAGGTGAAGCTGTATACATCCCTCCCTCTCCCTGTGTTCCAGTAGATACATGTGGTGCTGGCGATGCATACGCTTCTGGCATTCTGTACGGTGTTTTACGAGGCATGTCGGATTTGAGAAGTATCGGTACAATAGCATCTAAGGTAGCATCCACTGTTGTTGCGCAGCAGGGAACGAGGCTACGGATTTCAGATGCAGTTAAATTGGCTGAATCTTTTGCATTTCAACTTGATACATCGACTGTTCGATCTGATGTTGGTACTGATCATATTTCCAGTGTTTAA 1437 0.4335 MSTSLSFVRLSCSSHSISPSFSHLPPQLPNSRASHFVFCRYRRRHVSGSSSISRGIFKVCSFSTLGGASEFDSLSQRSHDEEEDDEQQIRTRANDEDEVDDEEEEEEEEEESISSYVFPERWDVLGLGQAMVDFSGTIDDEFLKNLGLEKGTRKLVNHEERGRVLQAMDGCSYKAAAGGSLSNTLVALARLGGRSLRDPAINVGMAGSVASDLLGGFYREKLRRANVQFLSVPIKDATTGTVIVLTTPDAQRTMLAYQGTSSTVNFDTSLASAVSKTNILVVEGYLFELPDTIKTITKACMEARSNGALVAVTASDVSCIERHFDHFWEIIGNYADLIFANVDEARALCNFDAKESTVSVTRYLSQFVPLVSVTDGIRGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGVLRGMSDLRSIGTIASKVASTVVAQQGTRLRISDAVKLAESFAFQLDTSTVRSDVGTDHISSV* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3900 478 MobiDBLite consensus disorder prediction 74 95 - -
Psa7g3900 478 MobiDBLite consensus disorder prediction 72 114 - -
Psa7g3900 478 MobiDBLite consensus disorder prediction 96 113 - -
Psa7g3900 478 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 400 413 IPR002173 GO:0016773
Psa7g3900 478 Gene3D - 131 257 - -
Psa7g3900 478 PANTHER HEXOKINASE FAMILY MEMBER 94 468 - -
Psa7g3900 478 PANTHER KINASE, PUTATIVE, EXPRESSED-RELATED 94 468 - -
Psa7g3900 478 Pfam pfkB family carbohydrate kinase 173 445 IPR011611 -
Psa7g3900 478 Coils Coil 92 112 - -
Psa7g3900 478 SUPERFAMILY Ribokinase-like 122 445 IPR029056 -
Psa7g3900 478 CDD adenosine_kinase 121 446 - -
Psa7g3900 478 Gene3D - 125 442 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3900 Psa-Chr7 324639588 324643918 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3900 - - lang:109355577 664.455