Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3727 ATGTTTTCCGCTAGCAAAATCAAAGCGGTTGATTTTTACAGAAAAATCCCTAGAGATTTGACTGAGGCGTCGTTGTCAGGAGCGGGGTTATCCATCGTGGCAGCTCTCTCCATGATGTTTTTGTTTGGAATGGAACTTAATAATTATTTTGCTGTCACCACCACTACATCTGTGATTGTTGACACGAGTTCTGATGGTGACTTTTTACGTATAGATTTCAATATGAGTTTTCCTGCACTCTCGTGTGAGTTTGCATCGGTCGATGTGAATGACGTGCTGGGAACAAACAGGCTCAATATAACAAAAACAGTTCGTAAGTTTTCTATTGATTCAAATTTAAGACCCACTGGCTCTGAGTTTCATTCGGGAACAATTGCAAATGCTGTTAAGCATGATGATGAAGTAGATGAAGAATTTGTTGAAGGTGCTTTGCCACTCACGACACATAGCTTTGATAGATTTATTCAGCAGTTTCCAATTACAGTTGTAAATTTTTATGCACCTTGGTGTTCCTGGTGCCAACGCTTGAAACCTTCATGGGAGAAGGCAGCTAAAATAATGAGGGAGAGATATGATCCAGAAATGGATGGACGTATTCTTTTGGCAAAGGTAGATTGCACTAAAGAAGCTGATTTATGCAGGAGGCATCACATACAAGGGTATCCGTCTATTCGCATCTTTCGAAAAGGAAGTGATGTCAGAAGTGACCATGGACATCATGAACATGAGTCCTATTATGGAGATCGTGATACAGAAACCCTAGTCAAGACAATGGAGAATTTAGTGGCATCTCTTCCAACCGGATCTCAACATCTAGCTTTGGAGGATAAATCCAATGGAACAGACAATGTAAAAAGACCCGCACCATCAACCGGTGGATGTAGAATTGAGGGATATGTACGTGTGAAAAAGGTTCCAGGAAGCTTGGTTGTCTCAGCTAGATCAGATGCACATTCATTTGATGCTTCTCAAATGAACATGTCACATGTCGTAGACCATCTGACTTTTGGGAAAAAAGTGATGCCTAGAGCCTTGAGTGACGTGAAGCATTGGATACCATACATAGGAAGAAACCATGACAGGCTTAATGGGCGGTCATTTATCAACACTCGTGATTTGGAAGGAAATGTTACTATAGATCATTATATTCAGGTAGTTAAAACAGAGGTAATAACCAGAAAAGGTTATAAATTAATTGAGGAGTACGAGTACACAGCGCACAGCAATGTGGCACACAGCATAAACATCCCTGTTGCAAGGTTCCATCTTGAGCTCTCCCCCATGCAGGTCTTAATAACAGAGAACCAGAAGTCTTTTTCACATTTTATTACAAATATCTGTGCTATTATTGGGGGTGTTTTCACGGTAGCTGGAATTCTTGACTCGATTCTGCACAACACTATGAGGGCAATGAAAAAGGTTGAGCTTGGCAAGAATTTTTGA 1443 0.4068 MFSASKIKAVDFYRKIPRDLTEASLSGAGLSIVAALSMMFLFGMELNNYFAVTTTTSVIVDTSSDGDFLRIDFNMSFPALSCEFASVDVNDVLGTNRLNITKTVRKFSIDSNLRPTGSEFHSGTIANAVKHDDEVDEEFVEGALPLTTHSFDRFIQQFPITVVNFYAPWCSWCQRLKPSWEKAAKIMRERYDPEMDGRILLAKVDCTKEADLCRRHHIQGYPSIRIFRKGSDVRSDHGHHEHESYYGDRDTETLVKTMENLVASLPTGSQHLALEDKSNGTDNVKRPAPSTGGCRIEGYVRVKKVPGSLVVSARSDAHSFDASQMNMSHVVDHLTFGKKVMPRALSDVKHWIPYIGRNHDRLNGRSFINTRDLEGNVTIDHYIQVVKTEVITRKGYKLIEEYEYTAHSNVAHSINIPVARFHLELSPMQVLITENQKSFSHFITNICAIIGGVFTVAGILDSILHNTMRAMKKVELGKNF* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3727 480 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 480 - -
Psa7g3727 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 480 IPR045888 -
Psa7g3727 480 ProSiteProfiles Thioredoxin domain profile. 114 263 IPR013766 -
Psa7g3727 480 SUPERFAMILY Thioredoxin-like 144 261 IPR036249 -
Psa7g3727 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Psa7g3727 480 Gene3D Glutaredoxin 140 285 - -
Psa7g3727 480 Pfam Endoplasmic reticulum vesicle transporter 290 461 IPR012936 -
Psa7g3727 480 Pfam Thioredoxin 145 243 IPR013766 -
Psa7g3727 480 CDD PDI_a_family 144 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3727 Psa-Chr7 314280760 314291838 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3727 - - aprc:113860202 850.892