Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3707 ATGCGCGCCCCTACCGCCAGAAAACTATGCACTCTCAGCTCCTATTTCCGTTCACATTTACACAACAATCCCAAAAACCACGTTTCCTCTTTCAAAACATCAATTCCATTTGAAACCCAACACCATTTCGATTCTGACTTGAACCTCTCAACCATCAAACTCCATGATCCCTCTCCCCCAGAGGATATGCCTGAACTGGGTGAGGCCGCCACTCAGCTTTCTTCTATATTGTACACTCCTCCGGTAAAGAAACTTGTTGGTGAGAAAGTTGAGGATGAAGAAAAAGAGAAAAACATAGTGGAAATACCACTGATACTAGACTTTGCTCATGGCGATGCTTCAATTAAACGGAAGGAGGTAGCACGGGAGAGGAAACAAAAGTGGATTTTCAAAGACACTGGTGGGGAACGATCTGACAGGCTAATCAAAATTTGTGCAAGAAAACTAGGAGCAACTCCTACAGTTGATATGTTTGGCCGCTTGGGTCGAGAAACAGGCCTGAAAGAGTACGATTCATTGATCAGATTGTGCATAAAGAAGGCTAAGGAGACTGATGATGAATACATTGCTATTGACGAATTGGGCAAGACTTATCACCTTTTGAAATTGATGAGGGAATGCGGGCTTCAGCTAGAAGAGCAAACATATCGCCCACTTCTTGAGTATATAATTGACATGGGCCTTGTTCAAGAATTTCAACTTTTCTATGATGTTATCCAAGCCGGTAATCCCAGTTCAATTTCACGATTGGGTTACTATGAAATGTTGCTCTGGATAAGAGTTAACAATGAAGAAATGATCCGGGATATTTGTGAATACATTACAGTCGAAGATAGTAGAAACACTACTTCTTTACGAGAAAATTACTTATTGGCTCTTTGTGAAAGTGATCGCAAAACACAGATTTTGGATGTGTTGAAAAATATAGACATGACAAAGCTTACATCTGCAAAATGTATATCAAATATATTTCAATCGATGGGAAGGCTAGCGCTGGAATCAGATGCAGATAATTTACTTTTGGATTTGAGGGCATGCGATTATGATGCAGATAAAATTTCAAACTTCATTGCTTGTTATGTGGTTAACATTCCAAATTTAGCGGTTGAAGATATCATCTCAAAAATTGAGAGTTTGCATAATATTTTGGAAGTTCTGCCTTCATCCTCATCATATGCAAAGCTCATTTCGTATTGCTGTCGTATGCGCAAGGTAGATGCAGCTCTTGATATTGTTGATAAAATGGGTGAAGCGGGCTATATGCTTTCTACTCATAGGTTACAATCGATATTACAGATTTGTGAGGAAACTTATGATTATATTTTGGTCCATCGAATCTATTCCATCATCCGTCGCCATCACCATCATTTGGAGTTAAATGGTGAAATATGCAGATGTTTGATACACTTTTGTGTAAGATTAAAAGATTTTGAACGTGCATACGAGATGGTTAATGAATTGCAGGAAATGAATTTCAAACCTACGACAGCCATGTACAATGCCATAATGGCAGGATATTTTCGTGAGAAAAACATCGTTGGCGGCTTGACAGTCCTCAAACAGATGCAAGATGCCAATGTAGATCCCGATTCACAGACTTTCAGCTATTTGATTAGCAATTGTGAAACAGAAGATGATATAAATATGTATTATGAAGAACTGAAGCAATTTGACATCTACCCTACAAGACAAATTTTTATGGCCCTTGTTAATGCATATGCAGCTTGCGGCGAATTGGAGAAGGCAAAACAGGTAGTTCTTGATTCACGCATACCATTAAAGTGCTTAAATGAAATTAAGAGTGTCCTTGTCTCAGCTCTTGCATCTCATGGGCAACTGTCTGAGGCACTTGCTATCTATGAGGAGATCAAGAAAGCCGGACACAATCTGGAACCAAAAGCTGTTATAACACTCATTGATGAGTTGCGTCATATAAGTGGAGAGTTGGAGGGGTTGCTTCTTCTACTGAAAGAGTTGAGTGATCTAAACTACTGGGTTGACGGTTGCTTCAGGGTTATTCACTACTGTGTTGAGAACAATCATTTAAGTTGTGCTGTTGACCTATTCAAGCAACTCAAGGATAACTTCGAAAGTGATGATACAATGACAGAAGTTCTTTTCGATGCAGTGTATTCTCTAATCGCGGGATCCAAGTCATCACGTTTGCAGTTTGGCTTAGACTTGCTTTGGGCGATCAAGGATGAGCTTGGCCTTGTTCCTTCAAGGCAGTGTCTTGATTTTCTTCTAAGTGCCTGTGCCAATTCAGGAGATTTGAATAATGCTCGTTTGATTTGGAGAGAATACGAGGTTGCTGGATTTCCTTACAATGTATTAAGTTACGTGAGGATGTATCAAGCACTTTTGGCATCAGGAGATCAAAGATCCGCAGACTTTATACTCAAGAAAATTCCAAGAGATGATGCGGAGATTTGTACTGTCATATCGGCATGTCAAAAAACTTACGTTGATAAAGTTAAATCAGTAGAAGGGGAGAAGAAGAAGAAAATTGTTAAATCAGTAGAAGGTGTGGAGAAGAAAAAGAATGTTAAGTCAGTAGAAGAGGAGATGAAGAAAAAGAATGTTAAATTAGTAGAAGGGGAGATGAAGAAAAAGAATGTTAAATCCGAAGAAGGGAAGAAGAAGAAAAAGAAGAAAAAGAAAGGAACAGAAAAGAAACAAGAGAGTGAAGTGAGTGTTGAGTAG 2703 0.3907 MRAPTARKLCTLSSYFRSHLHNNPKNHVSSFKTSIPFETQHHFDSDLNLSTIKLHDPSPPEDMPELGEAATQLSSILYTPPVKKLVGEKVEDEEKEKNIVEIPLILDFAHGDASIKRKEVARERKQKWIFKDTGGERSDRLIKICARKLGATPTVDMFGRLGRETGLKEYDSLIRLCIKKAKETDDEYIAIDELGKTYHLLKLMRECGLQLEEQTYRPLLEYIIDMGLVQEFQLFYDVIQAGNPSSISRLGYYEMLLWIRVNNEEMIRDICEYITVEDSRNTTSLRENYLLALCESDRKTQILDVLKNIDMTKLTSAKCISNIFQSMGRLALESDADNLLLDLRACDYDADKISNFIACYVVNIPNLAVEDIISKIESLHNILEVLPSSSSYAKLISYCCRMRKVDAALDIVDKMGEAGYMLSTHRLQSILQICEETYDYILVHRIYSIIRRHHHHLELNGEICRCLIHFCVRLKDFERAYEMVNELQEMNFKPTTAMYNAIMAGYFREKNIVGGLTVLKQMQDANVDPDSQTFSYLISNCETEDDINMYYEELKQFDIYPTRQIFMALVNAYAACGELEKAKQVVLDSRIPLKCLNEIKSVLVSALASHGQLSEALAIYEEIKKAGHNLEPKAVITLIDELRHISGELEGLLLLLKELSDLNYWVDGCFRVIHYCVENNHLSCAVDLFKQLKDNFESDDTMTEVLFDAVYSLIAGSKSSRLQFGLDLLWAIKDELGLVPSRQCLDFLLSACANSGDLNNARLIWREYEVAGFPYNVLSYVRMYQALLASGDQRSADFILKKIPRDDAEICTVISACQKTYVDKVKSVEGEKKKKIVKSVEGVEKKKNVKSVEEEMKKKNVKLVEGEMKKKNVKSEEGKKKKKKKKKGTEKKQESEVSVE* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3707 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 495 529 IPR002885 -
Psa7g3707 900 Gene3D Tetratricopeptide repeat domain 421 548 IPR011990 GO:0005515
Psa7g3707 900 PANTHER OS02G0132600 PROTEIN 7 833 - -
Psa7g3707 900 Pfam Pentacotripeptide-repeat region of PRORP 391 557 IPR033443 -
Psa7g3707 900 Gene3D Tetratricopeptide repeat domain 549 668 IPR011990 GO:0005515
Psa7g3707 900 Gene3D Tetratricopeptide repeat domain 669 899 IPR011990 GO:0005515
Psa7g3707 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 388 422 IPR002885 -
Psa7g3707 900 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 460 494 IPR002885 -
Psa7g3707 900 Pfam PPR repeat 602 627 IPR002885 -
Psa7g3707 900 TIGRFAM PPR: pentatricopeptide repeat domain 391 420 IPR002885 -
Psa7g3707 900 TIGRFAM PPR: pentatricopeptide repeat domain 498 530 IPR002885 -
Psa7g3707 900 TIGRFAM PPR: pentatricopeptide repeat domain 463 495 IPR002885 -
Psa7g3707 900 MobiDBLite consensus disorder prediction 863 900 - -
Psa7g3707 900 PANTHER OS02G0132600 PROTEIN 7 833 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3707 Psa-Chr7 312865860 312883795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3707 358 659 Glycosyltransferase AT1G05670 21.914 4.98e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3707 - - cam:101502375 1306.58