Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3633 ATGGCGTGTATCAAAGGGGTTAATCGATCGGCGTCAGTCGCACTGGCGCCGGATGCACCGTATCTGGCTGCCGGTACTATGGCCGGCGCTGTTGATCTGTCTTTTAGCTCATCGGCAAACCTCGAAATATTCAAGCTAGATTTCCAATCCGATGATCCCGAACTGCCTCTCGTCGCTGAATACCCTAGCTCCGACCGCTTCAACCGTCTCTCATGGGGTCGAAACGGTTCTTCGTCTGAAGAATTTTCTCTTGGTCTCGTTGCCGGTGGATTAGTTGATGGAAACATTGACATATGGAATCCTCTCGCTATGATCCGCTCGGAGGCAAATGAAAGCTCTCTCGTTGGACACCTTGTAACACATAAGGGACCGGTTAGAGGTCTTGAGTTCAATACTATTACACCAAATCTTCTTGCATCCGGGGCTGAGGATGGTGAAATTTGCATATGGGATTTGGCCAATCCTTCAGAGCGTACACATTATCCAACATTAAAGGGTAGTGGCTCTGCTTCCCAGGGGGAAGTTTCATTCTTATCTTGGAATAGTAAAGTTCAACACATATTAGCTTCCACTTCATATAATGGGACCACTGTGGTCTGGGACCTAAAGAAGCAAAAGCCAGTGATAAGCTTTGCAGATTCAGTTAGACGGCGGTGCTCAGCTTTGCAGTGGAATCCGGAAGTTATCACACAACTTGTTGTTGCATCAGATGAAGACGGATCTCCTTCTTTAAGGCTGTGGGATATGAGGAATGTTATGACACCAATAAGGGAGTTTGTAGGGCACACTAGAGGAGTTATTGCAATGTCATGGTGTCCCAATGATAGCTCTTATTTGCTTACCTGTGGCAAAGATAGCCGGACCATATGTTGGGACACTACTACTGGAGAGATTGCCTATGAATTGCCAGCTGGAACCAACTGGAACTTTGATGTCCATTGGTATTCTAAGATACCTGGAGTAATATCAGCATCTTCCTTTGATGGAAAAATTGGCATATACAATATTAAGGGTTGCCGTCAAGATGGTTCTGGAGAGAGTGATTCTGGTGCAGTACTACTGCGAGCTCCAAAATGGTATAAACGTCCTACTGGCGTGTCTTTTGGCTTTGGGGGTAAACTTGTGTCATTTCATCCCGGTACTTCTGCTGGGGCTTCAGAGGTTTATGTGCATAACATGGTCACTGAAGACGGTCTGGTGAGTCGTTCATCTGAATTTGAAGCTGCAATACAAAATGGGGAAAGACCTTTATTAAGGGTCCTATGCGATAAAAAGTCTCAGGAATCAAAATCTGTGGAGGAAAGGGAAACATGGGGATTTTTGAAGGTTATGTTTGAAGATGATGGAACTGCAAGAACAAAACTTCTCACACACCTTGGTTTTGATGTACCTAGTGAAGCAAAAGACACAGCTAATGATGATCTTTCCCAGGAAGTAAATGCTCTTGGACTTGAGGACACAGCTGTTAATAATGCAGGACACGTGGCTACTAATGAAACCACTATTTTCTCTTCTGACAATGGGGAGGATTTCTTTAACAATCTTCCCAGTCCTAAAGCTGATACTCCTCCATCTACAGCTGTTAGCAACTTTGTTGCAGATAATGCAAATGGTTCAGAGAAAGTCGAAGATGATGATGTGGAAGTGGAAGAGAGCAGTGATCCTTCATTTGATGACATTGTTCAGCGTGCTTTAGTCGTCGGTGACTATAAGGGGGCAGTTTCTCAATGCATATCTGCTAATAAATGGGCTGATGCTTTAGTTATTGCTCATGTGGGTAGTACCTCCTTGTGGGAAAGTACACGGGATCAATACCTTAAGAAGAACCGATCACCATACTTAAAGGTTGTATCAGCGATGGTGAGCAATGATCTCTTGAGCCTTGTGAACACTAGGCCTCTAAAGTTCTGGAAAGAAACCCTTGCTCTTCTTTGCAGTTTTGCTCAGAGAGATGAATGGACTATGCTTTGCGACACACTTGCTTCAAAACTCATGGGGGCTGGCAATACATTAGCTGCAACTCTTTGTTATATATGTGCTGGAAATATTGATAAAACAGTTGAAATTTGGTCGAGGAGCCTGTCAGATGAGTACGAGGGGAAATCTTATGTTGACCTTCTTCAGGATTTGATGGAAAAAACTATTGTTCTTGCCTTGGCAACTGGGCAGAAGCGGTTTAGTGCCTCTCTGTGCAAGCTTGTTGAGAAATATGCTGAAATTTTAGCAAGTCAAGGGTTGCTGACCACAGCAATGGAATATCTTAAACTTTTGGGTTCTGAAGAACTTTCAACTGAACTTGTGATTTTGAAGGACCGTATTGCATTGTCTACAGAACCTGAGAAAGACTTAAAAACCACTGCTTTTGAAAATTCTCAATCACACAGTGGATCCTTTTATGCGGCTGATAATTCCAATTATAATATAAGTTATTACCAGGATTCCGTATCCCCTCAAGTGCCGCATGGTGTTTCTGGAGTTCAATATCCTGCAAGCTATCCACAGCCATTTGATCCTAGATATGGGAGTGGTTACGGTGCTCCTGCTCCACACCAGCAACCCCAACAGCCCAATTTGTTTGTTCCATCACAGGCTACTCAGGTTCCCCAACCTCCCCAGCTGAACTTCTCAAATACTGCTGTGGCACCAGCTCCTGTGAGAACTTTTGATCCTCAAACTCCTCCTGTACTTAAAAATGTGGAGCTATATCAGCAGCCCACATTGGGTTCTCAATTGTATAATACAAACAACAATCCACCATTCCAGCCTACCAATCCACCTTACCAGCCTACGCCTCCTGCTCCATCACAAATGAACTTGGGTCATGGCCACAACGTACCACCACAAGTGTTGGCACCTACCTCGAATCCAATGGGGTTCATGCCAATCCCTAGTCCTGCTGGCGTTCAAAGACCTGGTGTGGGATCAATTCAGCCTCCCAGTCCCCCGCAACCGCAATCTGTGCAACCCGCTGCTGCACCGGCAGCTCCACCACCTACTGTGCAGACTGCTGATACTTCAAAAGTACCTGCACACCAAATGCCTATTGTTTCAACATTGACAAGACTTTTCAATGAGACATCGGAAGCACTTGGAGGTTCACGTGCAAACCCAGCAAAGAGGCGGGAAATAGAAGACAACTCAAAGAGACTTGGTGGGTTGTTCGCAAAGTTGAACAGTGGGGACATCTCCAAAAATGCTTCTGATAAGCTCCTTCAGCTTTGTCAAGCGTTAGACAATGGTGATTTTGGTACTGCCCTTCAAATTCAGGTTCTTCTCACTACTACTGAATGGGATGAATGCCAGTCCTGGTTAGGTTCACTGAAGCGCATGATCAAGACTAGGCAGAATGTCAGGTTAAGTTAA 3363 0.4481 MACIKGVNRSASVALAPDAPYLAAGTMAGAVDLSFSSSANLEIFKLDFQSDDPELPLVAEYPSSDRFNRLSWGRNGSSSEEFSLGLVAGGLVDGNIDIWNPLAMIRSEANESSLVGHLVTHKGPVRGLEFNTITPNLLASGAEDGEICIWDLANPSERTHYPTLKGSGSASQGEVSFLSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFADSVRRRCSALQWNPEVITQLVVASDEDGSPSLRLWDMRNVMTPIREFVGHTRGVIAMSWCPNDSSYLLTCGKDSRTICWDTTTGEIAYELPAGTNWNFDVHWYSKIPGVISASSFDGKIGIYNIKGCRQDGSGESDSGAVLLRAPKWYKRPTGVSFGFGGKLVSFHPGTSAGASEVYVHNMVTEDGLVSRSSEFEAAIQNGERPLLRVLCDKKSQESKSVEERETWGFLKVMFEDDGTARTKLLTHLGFDVPSEAKDTANDDLSQEVNALGLEDTAVNNAGHVATNETTIFSSDNGEDFFNNLPSPKADTPPSTAVSNFVADNANGSEKVEDDDVEVEESSDPSFDDIVQRALVVGDYKGAVSQCISANKWADALVIAHVGSTSLWESTRDQYLKKNRSPYLKVVSAMVSNDLLSLVNTRPLKFWKETLALLCSFAQRDEWTMLCDTLASKLMGAGNTLAATLCYICAGNIDKTVEIWSRSLSDEYEGKSYVDLLQDLMEKTIVLALATGQKRFSASLCKLVEKYAEILASQGLLTTAMEYLKLLGSEELSTELVILKDRIALSTEPEKDLKTTAFENSQSHSGSFYAADNSNYNISYYQDSVSPQVPHGVSGVQYPASYPQPFDPRYGSGYGAPAPHQQPQQPNLFVPSQATQVPQPPQLNFSNTAVAPAPVRTFDPQTPPVLKNVELYQQPTLGSQLYNTNNNPPFQPTNPPYQPTPPAPSQMNLGHGHNVPPQVLAPTSNPMGFMPIPSPAGVQRPGVGSIQPPSPPQPQSVQPAAAPAAPPPTVQTADTSKVPAHQMPIVSTLTRLFNETSEALGGSRANPAKRREIEDNSKRLGGLFAKLNSGDISKNASDKLLQLCQALDNGDFGTALQIQVLLTTTEWDECQSWLGSLKRMIKTRQNVRLS* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3633 1120 Gene3D - 350 777 - -
Psa7g3633 1120 Gene3D Functional domain of the splicing factor Prp18 1005 1119 - -
Psa7g3633 1120 Gene3D - 1 337 IPR015943 GO:0005515
Psa7g3633 1120 ProSiteProfiles Trp-Asp (WD) repeats profile. 118 160 IPR001680 GO:0005515
Psa7g3633 1120 Pfam Sec23-binding domain of Sec16 561 757 IPR024298 -
Psa7g3633 1120 Pfam WD domain, G-beta repeat 114 151 IPR001680 GO:0005515
Psa7g3633 1120 MobiDBLite consensus disorder prediction 975 996 - -
Psa7g3633 1120 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 301 IPR001680 GO:0005515
Psa7g3633 1120 SUPERFAMILY WD40 repeat-like 12 337 IPR036322 GO:0005515
Psa7g3633 1120 MobiDBLite consensus disorder prediction 968 1009 - -
Psa7g3633 1120 ProSitePatterns Trp-Asp (WD) repeats signature. 138 152 IPR019775 -
Psa7g3633 1120 PANTHER SEC31-RELATED PROTEIN 2 1118 IPR040251 GO:0006888
Psa7g3633 1120 PANTHER WD40/YVTN REPEAT-LIKE-CONTAINING DOMAIN, ANCESTRAL COATOMER ELEMENT 1, SEC16/SEC31-RELATED 2 1118 - -
Psa7g3633 1120 SMART WD40_4 161 201 IPR001680 GO:0005515
Psa7g3633 1120 SMART WD40_4 252 292 IPR001680 GO:0005515
Psa7g3633 1120 SMART WD40_4 295 335 IPR001680 GO:0005515
Psa7g3633 1120 SMART WD40_4 54 100 IPR001680 GO:0005515
Psa7g3633 1120 SMART WD40_4 204 248 IPR001680 GO:0005515
Psa7g3633 1120 SMART WD40_4 111 151 IPR001680 GO:0005515
Psa7g3633 1120 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 118 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3633 Psa-Chr7 302998528 303008657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3633 118 352 Miscellaneous Gene Families AT5G08390 23.629 1.70e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3633 K14005 - gmx:100788642 1887.08