Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3604 ATGGCAGAACCTAAAGTTAAATACGATCGCCAACTCAGAATATGGGGTGACCAAGGACAGGCAGCCCTTGAGAAATCTAATATTTGCTTGCTTAACTGTGGTCCTACTGGTTCTGAGACACTTAAGAATCTCGTTCTTGGTGGGATTGGAAGCATCACTGTAGTTGATGGATCTAAAGTTGAAGTTGGTGACCTTGGAAACAATTTTTTGGTTGATGAATCAAGCCTTGGGCAGTCAAAGGCAAAATGTGTGTGCTCATTTCTCCAGGAGCTGAATGATGCAGTTAAAGCAAAATATGTAGAAGAGTATCCGGATGCATTGATTGAGACAAATCCATCATTCTTTTCTCAATTTACTTTGGTTGTTGCCACGCAGCTGGTGGAAAGTTCAATGGTAAAGCTTGACCGAATCTGCAGGAATGCAAATGTTATATTGATCTTTGCCCGCTCCTATGGCCTTACTGGGTTTGTACGAATCAGTTTGAAGGAGCATACTGTGATTGAATCAAAGCCTGAGCATTTTCTGGATGATCTTCGGTTGAATAATCCTTGGCCTGAACTAAAGAGGTTTGCAGAGGGGTTTGACTTGAACGTGCAAGATCCGGTTGTTCATAAACATATACCATATGTTGTCATTCTTGTCAAGATGGCTGATGAGTGGGCCAAAAACCATGGTGGTAGGCTTCCATCAACTAGAGAAGAAAAAAAGGAGTTCAAGGAGCTTCTTAAGGCTGGGATGGTTGCACAAGATGAAGATAATTATAAAGAAGCTATTGAGTCCTCATTCAAAGTATTTGCCCCCCGAGGAATTAGTTCAGAGTTGCAACAGATGCTAAATGATAGTTCTGCAGAAGTAGATTCTAGTTCGTCGGATTTTTGGGTGTTGGTGGCAGCTCTAAAGGATTTTGTTACAAATGAAGGTGGTGGGGAGGCACCTCTTGAAGGATCTATACCAGATATGACTTCTTCCACTGAACAATATGTGAATTTACAGAATATATATCAGGCTAAGGCTGAGGCTGACATTCTTGCAATAGAAAGAGTGGCGAGAAATACTTTGAAGAAAATTGGTCGAGATCCAAATAGCATTCCAAGGGCAACAGTTAAAAGCTTCTGTAAAAATGCAAGAAAACTCAAAGTTTGCAGATATCGCCTGATTGAAGATGAGTTTAATTCTCCAAACCTACCGGAGTTACAGAAGTACTTAACAGACGAGGATTACAGCATTGCTATGGGAATTTATATTTTGCTTCGGGCTGTTGACCGGTTTGCTGCTAACTACAACAGTTTTCCTGGACAGTTTGACAGTGCAATGGACGAGGATATATCTCGATTAAAGAGCACAGCAGTTGGCCTACTTAATGACTTGGGATGCAATAGTGCTACTTTAGCTGAGGACCTTATCAACGAGATGTGTCGATTTGGGGCTGCAGAGCTTCATGCTGTTGCTGCTTTGGTTGGAGGAATTGCATCGCAAGAAGCGATCAAGCTCATAACAAGACAATTTGTACCAATATCTGGGACCTATATATTCAACGGCATTGATCACAAGTCACAGCTATTGTTATTGTAA 1572 0.4135 MAEPKVKYDRQLRIWGDQGQAALEKSNICLLNCGPTGSETLKNLVLGGIGSITVVDGSKVEVGDLGNNFLVDESSLGQSKAKCVCSFLQELNDAVKAKYVEEYPDALIETNPSFFSQFTLVVATQLVESSMVKLDRICRNANVILIFARSYGLTGFVRISLKEHTVIESKPEHFLDDLRLNNPWPELKRFAEGFDLNVQDPVVHKHIPYVVILVKMADEWAKNHGGRLPSTREEKKEFKELLKAGMVAQDEDNYKEAIESSFKVFAPRGISSELQQMLNDSSAEVDSSSSDFWVLVAALKDFVTNEGGGEAPLEGSIPDMTSSTEQYVNLQNIYQAKAEADILAIERVARNTLKKIGRDPNSIPRATVKSFCKNARKLKVCRYRLIEDEFNSPNLPELQKYLTDEDYSIAMGIYILLRAVDRFAANYNSFPGQFDSAMDEDISRLKSTAVGLLNDLGCNSATLAEDLINEMCRFGAAELHAVAALVGGIASQEAIKLITRQFVPISGTYIFNGIDHKSQLLLL* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3604 523 PIRSF APP-BP1 1 523 IPR030667 GO:0019781|GO:0045116
Psa7g3604 523 Pfam ThiF family 8 501 IPR000594 -
Psa7g3604 523 Gene3D - 360 523 - -
Psa7g3604 523 Gene3D - 2 268 - -
Psa7g3604 523 CDD APPBP1_RUB 7 521 - -
Psa7g3604 523 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 523 IPR045886 -
Psa7g3604 523 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 519 IPR035985 GO:0008641
Psa7g3604 523 PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT 2 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3604 Psa-Chr7 297161998 297172973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3604 7 78 EF-hand Containing Proteins AT2G30110 33.766 1.87e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3604 K04532 - gmx:100793799 941.799