Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3446 ATGGCTTCATCATCACTCTCTTCTTCGTCCCTAAAATTGAATCACCTAAGAACACTGTGTTATCATTTAAAGCAAAATCGATGCTATTCAAAGTTGAACCATTCATCAACATCATCAGAGTTAGACAAAGCTTCTGACGATGTACCAACTTCAGGAATTTGCAGACCTTTGTCCGAAATACTGAAGGAGCTGAACAAGAAAGTTCCCGATTCCCTCGTCAAAACTCGCATTGAGAAAGATGGGTTTCCCATTAGATACATTCCTTGGCACGTTGTGAACCGTGTTTTGAATTTGCACGCTCCAGAGTGGTCTGGTGAGGTTCGGAATATCGCCTATTCTGCTGATGCCAAGTCTGTTTCTGTGGTTTACCGAGTTACTCTTTATGGGACTGATGCTGAGATATTTAGGGAATCAACTGGTACTGCTTCAATAGATGATACAAGCTATGGAGATCCAGTACAGAAGGCAGAAGCAATGGCTTTTCGAAGAGCTTGTGCGCGCTTTGGGCTGGGGCTCCACCTTTATCACGAAGAGTCCTCATAA 543 0.4328 MASSSLSSSSLKLNHLRTLCYHLKQNRCYSKLNHSSTSSELDKASDDVPTSGICRPLSEILKELNKKVPDSLVKTRIEKDGFPIRYIPWHVVNRVLNLHAPEWSGEVRNIAYSADAKSVSVVYRVTLYGTDAEIFRESTGTASIDDTSYGDPVQKAEAMAFRRACARFGLGLHLYHEESS* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3446 180 Pfam Rad52/22 family double-strand break repair protein 58 178 IPR041247 -
Psa7g3446 180 PANTHER - 16 179 IPR037489 GO:0000724|GO:0003677
Psa7g3446 180 PANTHER DNA REPAIR RAD52-LIKE PROTEIN 1, MITOCHONDRIAL 16 179 - -
Psa7g3446 180 Gene3D DNA repair protein Rad52/59/22 55 180 IPR042525 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3446 Psa-Chr7 270975616 270980507 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3446 - - adu:107477634 265.774