Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3391 ATGGCCGAAAATAACAACTCAAACCCTACTCCTCCTCCACCCTCCTCACCACCTCTCACACCGTCGCATCAACTAACCGATTCATCCACCCTAACTCCCCATCCAGAACCACAACCGGAACTCCCCGTTACCGACCAAAAAGAACTCTCCGATGCACCACCGCAACCAACCGAATCAGAAACCGATTCAAAAGGTAACCCGTCACAAGATGTAGTAGCAGTTGAACCCTCACCAGAACCAGAACAACACCACCAACAACAGAAGAAAATTCCAATAAACTTAGTTTCATTCAAAGAAGAAAGCAACAAACTAAGCGATCTCTCCGATTCGGAACGAACCTCCCTCGACCAACTCAAACAACTCCTAACCGAATCAATCAAACCAGAACAACAACAAGTTTCAATCTACGGCGTTCCGTTACTCCAAGACGAACGAACCGATGTAATCCTCCTCAAATTCCTCCGAGCACGCGACTTCAAAGTGAAAGACTCACACACAATGATCACCAACACGCTTCAATGGAGGAAAGATTTCAACATAGACGCACTTCTGGACGAAGATCTAGGGGATGACTTAGACAAAGTTGTATTCATGCATGGCTTTTCAAGAGAGGCACATCCTGTTTGTTATAATGTCTATGGCGAGTTTCAGAATAAGGAACTTTATGATAAGACTTTTGGGAATGAGGAAAGGAGGAACACGTTTTTGCGTTGGAGGATTCAGTTTTTGGAGAAGAGTATTAGGAAACTTGATTTTTATCCTGGTGGTGTTAACACTGTTTTTCAAGTTAATGATCTTAAAAATTCTCCGGGTCCGGCTAAAAGAGAACTTAGACTTGCTACTAAACAGGCTTTGCAGTTGCTTCAGGATAATTATCCCGAGTTTGTTGCTAAACAGGTTTTTATCAATGTGCCATGGTGGTATCTTGCATTCTATACCATGATCAATCCGTTCTTGACTCAGAGGACCAAGAGTAAATTTGTGTTTGCAGGCCCATCGAAGTCTCCCGACACGCTTTTCAAGTATATTTCTCCTGAGCAAGTGCCAGTTCAATATGGTGGCCTGAGTGTTGATTTTTGTGATTGCAACCCGGATTTCAGCATCAATGATCCCACCACGGAAATTCCTGTAAAGCCGACAACTAAGCAAACTGTGGAAATTGCTATATATGAGAAATGCATTATTGTCTGGGAGTTACGCGTGGTGGGCTGGGAAGTTAGTTATAGTGCTGAATTCAAACCCGATGCTGAGGATAGATATGCAGTTATTATACAGAAGGCTACTAAGATGGCCCCTAGCGACGAACCAGTAGTTTCCAACAGCTTTAAAGTCAGTGAACTAGGGAAATTGTTCCTCACTGTCGACAATCCTACCTTGAAAAAGAAGAGGCTTCTTTACAGGTTCAAGATCAAACCCTACTCTGATTGA 1428 0.4321 MAENNNSNPTPPPPSSPPLTPSHQLTDSSTLTPHPEPQPELPVTDQKELSDAPPQPTESETDSKGNPSQDVVAVEPSPEPEQHHQQQKKIPINLVSFKEESNKLSDLSDSERTSLDQLKQLLTESIKPEQQQVSIYGVPLLQDERTDVILLKFLRARDFKVKDSHTMITNTLQWRKDFNIDALLDEDLGDDLDKVVFMHGFSREAHPVCYNVYGEFQNKELYDKTFGNEERRNTFLRWRIQFLEKSIRKLDFYPGGVNTVFQVNDLKNSPGPAKRELRLATKQALQLLQDNYPEFVAKQVFINVPWWYLAFYTMINPFLTQRTKSKFVFAGPSKSPDTLFKYISPEQVPVQYGGLSVDFCDCNPDFSINDPTTEIPVKPTTKQTVEIAIYEKCIIVWELRVVGWEVSYSAEFKPDAEDRYAVIIQKATKMAPSDEPVVSNSFKVSELGKLFLTVDNPTLKKKRLLYRFKIKPYSD* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3391 475 PRINTS Cellular retinaldehyde-binding protein signature 149 171 - -
Psa7g3391 475 PRINTS Cellular retinaldehyde-binding protein signature 312 331 - -
Psa7g3391 475 PANTHER PATELLIN-3 38 475 - -
Psa7g3391 475 Pfam CRAL/TRIO domain 195 354 IPR001251 -
Psa7g3391 475 SMART sec14_4 190 357 IPR001251 -
Psa7g3391 475 Gene3D - 79 366 IPR036865 -
Psa7g3391 475 MobiDBLite consensus disorder prediction 50 70 - -
Psa7g3391 475 Pfam CRAL/TRIO, N-terminal domain 115 170 IPR011074 -
Psa7g3391 475 CDD SEC14 194 355 IPR001251 -
Psa7g3391 475 SUPERFAMILY CRAL/TRIO domain 195 363 IPR036865 -
Psa7g3391 475 PANTHER PATELLIN-1 38 475 IPR044834 GO:0008289
Psa7g3391 475 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 185 354 IPR001251 -
Psa7g3391 475 MobiDBLite consensus disorder prediction 1 91 - -
Psa7g3391 475 SUPERFAMILY CRAL/TRIO N-terminal domain 99 187 IPR036273 -
Psa7g3391 475 Gene3D GOLD domain 367 471 - -
Psa7g3391 475 SMART CRAL_TRIO_N_2 146 171 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3391 Psa-Chr7 262671134 262673453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3391 150 349 Acyl Lipid Metabolism Gene Families AT1G55840 30.093 9.36e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3391 - - mnt:21391677 631.328