Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3367 ATGGCTCAAGAACCCCAAAAACCAGCTGATGAAGTCGTTACAACTACCTCTCAAACTCCCGTCGATAATCCACCACCCGCTGAAGAAGTTCTAACCACCACCACCACCGCCGCCGCCGCAGCTGTTGCTGAGGTCTCGACTGACAAGGACGCCGTTGTTGTTACTCCGGTTCCTGAAGATCCCGAGAAGCCGGCTGAAGCTGTGACGGAGAACGCTAAGCCTGCTGATGAGACCGCCGCTGAGAACAAAATTTCTCAATCGGTTTCTTTCAAGGAAGAAACCAACGTGGTTTCTGAACTTCCTGAACTTCAGAAAAAAGCACTCGATGAACTCAAACAGCTTATTAAGGAAGCACTTAACAAACGCGAGTTCACCGCTCCTCCAGTTAAGGCACCTGAAGTAACCGCACAAGACGACAAAAAACCTGAAGAAGAAAACAAAACCGAAGAAAAGAAGGAAGAAGTAGTAGCAGAAGAGAAACAGGTTGAAGAAGTAGTCGTTGAAGAGAAAAAAGTTGAAGGAGAAGTTGAAAAGAAAGAAGAAAAAGCTTCAAGTTCCGAGGAACCTAAAACCGAAGCTGAAGCTAAAACCGAACCTGAAGAGAAGAAGGTGGAGGAGACAGTGGTGGAAGTTGTTGAAAAAATAGCTTCGAGTACTGAAGAAGACGGTGCGAAAACGGTTGAAGCTATTCAAGAAAGCATAGTATCAGTTGCAGTTACTAACGGTGATGGTGAACAACCTGTTACTGAACTGCCTGTTGCTGTTGATGTGGAGGTTCCTCCTTCTACACCAGAAGAAGTGAAAGGACGCTTTCACGATGATCCAAACAAACTGTTCTTTGGAGAAAGGAATTTGGAATTGAAGCACTTCTTCAAGAAGATCTTGGAACTGATTAGGACAAAGTTGTTTTCACCGATGGTTATGACAAAGAAGTTTGAGAACAAGGAATTGTATCAAAAAAGTTTCTCTGACAACGAGAAGAGAAACAAGTTTATCCGTTGGAGGATTCAGTCATTGGAGAAAAGTGTTAGAAAACTCGACATTGCTCCATCTGGAATCGCTACTATTGTTCAAATTAATGATCTTAAAAATTCTCCTGGATTTGTTAAGAAGGAGCTTAGACAAGCTACTAATCAGGCACTTCAATTGCTTCAGGATAACTACCCCAAATTTGTTGCCAAACAGATTTTTATCAATGTTCCTTGGTGGTACCTTGCCTTTTCTAGGATGATTAGTCCTTTCCTGACACAGAGGACCAAGAGCAAATTTGTATTTGCTGGCTCCTCCAAATCTTCTGATACCCTTTTCAAATATATAGCTCCTGAGCAAGTGCCAGTTCAATATGGGGGACTTAGCAGAGAAGGCGAACAGGAATTCACCACGGCTGACCCTGCTACAGAGGTTATTATCAAACCAGCAACAAAACATGCTGTTGAGTTCCCAATTTCTGAGAAAAGCACTGTAGTTTGGGAAATCAGAGTTGTGGATTGGAATGTGAGCTATGGAGCAGAATTTGTGCCTAGTGCTGAAGATGGATACACAGTGATAGTACAGAAGAACAGGAAAATCTCACCAGCTGATGAAACAGTAATTACCAACACCTTCAAAATCGGAGAACCTGGTAAAGTTGTACTCACCATTGATAACCAAACATCAAAGAAAAAGAAGCTTCTTTACCGGTCAAAGACCACACCCATCTCTGAATAA 1707 0.4265 MAQEPQKPADEVVTTTSQTPVDNPPPAEEVLTTTTTAAAAAVAEVSTDKDAVVVTPVPEDPEKPAEAVTENAKPADETAAENKISQSVSFKEETNVVSELPELQKKALDELKQLIKEALNKREFTAPPVKAPEVTAQDDKKPEEENKTEEKKEEVVAEEKQVEEVVVEEKKVEGEVEKKEEKASSSEEPKTEAEAKTEPEEKKVEETVVEVVEKIASSTEEDGAKTVEAIQESIVSVAVTNGDGEQPVTELPVAVDVEVPPSTPEEVKGRFHDDPNKLFFGERNLELKHFFKKILELIRTKLFSPMVMTKKFENKELYQKSFSDNEKRNKFIRWRIQSLEKSVRKLDIAPSGIATIVQINDLKNSPGFVKKELRQATNQALQLLQDNYPKFVAKQIFINVPWWYLAFSRMISPFLTQRTKSKFVFAGSSKSSDTLFKYIAPEQVPVQYGGLSREGEQEFTTADPATEVIIKPATKHAVEFPISEKSTVVWEIRVVDWNVSYGAEFVPSAEDGYTVIVQKNRKISPADETVITNTFKIGEPGKVVLTIDNQTSKKKKLLYRSKTTPISE* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3367 568 PANTHER PATELLIN-1 1 268 IPR044834 GO:0008289
Psa7g3367 568 PANTHER PATELLIN-1 311 568 IPR044834 GO:0008289
Psa7g3367 568 Coils Coil 162 182 - -
Psa7g3367 568 MobiDBLite consensus disorder prediction 56 84 - -
Psa7g3367 568 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 467 563 IPR036598 -
Psa7g3367 568 SUPERFAMILY CRAL/TRIO domain 322 452 IPR036865 -
Psa7g3367 568 ProSiteProfiles GOLD domain profile. 457 563 IPR009038 -
Psa7g3367 568 Pfam CRAL/TRIO domain 326 450 IPR001251 -
Psa7g3367 568 MobiDBLite consensus disorder prediction 9 29 - -
Psa7g3367 568 Gene3D GOLD domain 468 563 - -
Psa7g3367 568 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 330 456 IPR001251 -
Psa7g3367 568 Gene3D - 285 467 IPR036865 -
Psa7g3367 568 MobiDBLite consensus disorder prediction 122 205 - -
Psa7g3367 568 SMART sec14_4 283 453 IPR001251 -
Psa7g3367 568 CDD SEC14 315 451 IPR001251 -
Psa7g3367 568 MobiDBLite consensus disorder prediction 134 205 - -
Psa7g3367 568 PANTHER PATELLIN-LIKE PROTEIN 311 568 - -
Psa7g3367 568 PANTHER PATELLIN-LIKE PROTEIN 1 268 - -
Psa7g3367 568 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3367 Psa-Chr7 259526452 259529573 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3367 - K19996 gmx:100794623 443.736