Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa7g3333 | ATGATGAACAAACTAGTAGTAGAAGTTCATGATGCTAGTAACCTAATGCCAAAAGATGGAAAAGGTTTAGCCAACCCTTTTGTTCAAATAAACTTTGATGAACAACAAGTGAAGACACAAACCAAACACAAAGATCTTAATCCTTATTTTAATGAAAAGTTTGTTTTCAACATAAACACATCAAGAGATCTATCCCACCAAACAATTGAGGTTGTTGTGTTCAATCACAATGAGAAAAAACCAACTAGTAAAAAGAATCTTCTTGGAAAGGTGAGAATTTCAGGTAATTCTATTCCTTATTCTGAATCTGAATCTAGTGTTAAACGTTACCCTCTTGAACATTCTAAAGGTGATATTGCTTTAAAAATGTTTGCTTTTCATGACCCTTTTGCTAATACACCCCCTCCACCTAATCCTCACCCTCCTCCACAACATTCACAAGCAAAATCAAACTCTTATGCTGAAATTCTTGAGCCTGATCCTGATGAGGAGATTCCTCTGCAAGAAATCAACACTAACATACACATGGAAGATGAAGAAAGCATGGTTAGTGATAGTGAGAAAAAGAAGAAGAATAAGAAGAAGAAAGAAAAAGAAGTTAGAACTTTTCATTCCATTGGAACTGAGAAACCTTCTTCTCATGGTCATGGTCATGGTCATGGTCATGCTCATGGCCATAGTCATGCTCCTGCTTCTGCTTTTGCTCCTGTTCATGCTGCAAAGTTTCCATCTTTTGTGTCACCGACAGTGGAAACTCAAACAAGAGTTGATTTAGCAAAATCAGGACCCTCAAATGTTATGTTAATGCAGATCCCTAGGCAGAATCCAGAATATGCATTGGTTGAAACAGCTCCACCACTTGCAGCTAGGTTGAGGTATAAAGGGGGGAATAAGGTATCAACTACTTATGATTTAGTTGAACAAATGCATTTTTTATATGTGAATGTTGTGAAAGCGAAAGATCTTCCTGTGATGGATATCACAGGTAGTCTTGACCCTTATGTGGAAGTGAAACTTGGTAATTACAAAGGTGTCACAAAGCATTTAGACAAGAATCAGCATCCTGTTTGGAAGCAAATCTTCGCCTTTTCGAAGGAGAGGTTGCAGTCAAATTTACTTGAAGTTACTGTGAAGGATAAGGATATCGGTAAAGATGATTTTGTTGGTAGGATTATGTTTGATCTCACTGAGATGCCGGTGAGGGTTCCGCCAGATAGTCCTTTGGCTCCTCAGTGGTATAGATTGGAAGATAAGAAAGGGATGAAGATACATAATGGTGAAATCATGCTTGCTGTTTGGATGGGAACACAAGCCGATGAGTCTTTTCCTGAGGCGTGGCATTCGGATGCTCATAATATAAGTCATCACAACCTTGCGAATACGCGGTCGAAGGTGTATTTTACGCCTAAGCTTTATTATCTTAGAGTTGAAGTTATTGAAGCTCAAGATTTGGTTCCTTCTGATAAAGGAAGAATACCGCAAGCTTCTGTTAGGGTTCAGCTAGGAAGTCAGATGAGGTTTACAAGGCCTTCTCAAATGAGAGCTGTTAATCCGATTTGGAACGAGGAGCTTATGTTCGTGGCAGCCGAGCCTTTTGAGGAATTTATAATTGTGACGGTAGAGGATAAGTTTGGTCCTAACAATATTGAAATCTTGGGAAGGGAGATTATGTCGGTGAGAAATGTTCCGCAGAGAATGGAGACTGGAAAGCTACCGGATTCTCGTTGGTTCAATCTTCATAGGCCTAGTGCGGTCGGCGAGGAAGAAACGGAGAGAAAGAAGGAGAAATTCTCTAGTAAGATTCACCTTCGGATTTGTCTAGAGGCGGGGTATCATGTTCTTGATGAGTCCACACATTTCAGCAGCGATCTTCAGCCGTCTTCGAAACACTTGAGGAAGAGAAACATTGGAATTCTCGAAGTCGGGATACTTAGTGCCCGAAACTTGCTACCTATGAAGGGAAAAGACGGTAGGACTACTGATGCATACTGTGTGGCCAAGTACGGCAACAAATGGGTTAGAACAAGAACTCTGCTTGACACGTTATCGCCTAGATGGAACGAGCAGTATACATGGGAAGTTCATGATCCATGCACCGTGATCACGGTTAGTGTTTTCGACAATCACCACATCAATGGTAGCAGTGACAACAAAGATCAGAGAATCGGAAAGGTAAGAATAAGGTTGTCAACTCTTGAAACTGATAGAGTATATACTCATTATTACCCTCTATTGGTTCTTCAACCTAATGGCTTAAAGAAGAATGGGGAACTTCATTTGGCTGTGAGGTTTACTTGCACAGCTTGGGTTAACATGGTAGCTCAATATGGAAGACCTTTGCTTCCGAAAATGCATTATGTTCAACCAATACCTGTTAGGCACATCGATTGGCTTCGTTATCAGGCCATGCAGATTGTCGCAGCAAGGCTAGCAAGAGCTGAGCCGCCACTTCGACGTGAATCAGTTGAGTACATGCTTGATGTGGATTACCATATGTGGAGTCTCAGGAGAAGCAAAGCCAACTTTCATCGCATAATGTCGCTGCTCTCGGGTTTTACGGCAGTGTGTAAATGGCTTAATGACATTTGCACTTGGAGAAACCCGGTGACAACTTGCCTTGTTCATGTTTTGTTCTTGATACTTGTTTGCTACCCTGAATTGATATTGCCAACCATTTTTCTTTACTTGTTTGTGATTGGGATTTGGAACTACCGGTTCCGGCCGAGGAATCCACCTCACATGGACGCCAGGCTTTCGCAAGCAGAAGCTGTTCATCCAGATGAATTGGACGAGGAATTTGACACTTTTCCAACTACAAGACCTTCAGATATTGTGAGAATGAGGTATGACAGATTGAGAAGTGTGGCAGGTAGAGTACAGACTGTGGTTGGAGATTTAGCTACTCAAGGAGAAAGAGCTCAAGCTATACTAAGTTGGAGAGACTCAAGGGCTACATCTATCTTCATCATCTTCTCACTGATCTGGGCTGTGTTCATTTACATCACTCCATTCCAAGTAATAGCAATTATAGTCGGCATCTTCATGCTTCGTCATCCTCGGTTTCGGAGCAAGATGCCATCAGTACCTGTTAATTTCTTCAAGAGATTGCCTTCCAAATCAGATTCAATGTTTTGA | 3135 | 0.4128 | MMNKLVVEVHDASNLMPKDGKGLANPFVQINFDEQQVKTQTKHKDLNPYFNEKFVFNINTSRDLSHQTIEVVVFNHNEKKPTSKKNLLGKVRISGNSIPYSESESSVKRYPLEHSKGDIALKMFAFHDPFANTPPPPNPHPPPQHSQAKSNSYAEILEPDPDEEIPLQEINTNIHMEDEESMVSDSEKKKKNKKKKEKEVRTFHSIGTEKPSSHGHGHGHGHAHGHSHAPASAFAPVHAAKFPSFVSPTVETQTRVDLAKSGPSNVMLMQIPRQNPEYALVETAPPLAARLRYKGGNKVSTTYDLVEQMHFLYVNVVKAKDLPVMDITGSLDPYVEVKLGNYKGVTKHLDKNQHPVWKQIFAFSKERLQSNLLEVTVKDKDIGKDDFVGRIMFDLTEMPVRVPPDSPLAPQWYRLEDKKGMKIHNGEIMLAVWMGTQADESFPEAWHSDAHNISHHNLANTRSKVYFTPKLYYLRVEVIEAQDLVPSDKGRIPQASVRVQLGSQMRFTRPSQMRAVNPIWNEELMFVAAEPFEEFIIVTVEDKFGPNNIEILGREIMSVRNVPQRMETGKLPDSRWFNLHRPSAVGEEETERKKEKFSSKIHLRICLEAGYHVLDESTHFSSDLQPSSKHLRKRNIGILEVGILSARNLLPMKGKDGRTTDAYCVAKYGNKWVRTRTLLDTLSPRWNEQYTWEVHDPCTVITVSVFDNHHINGSSDNKDQRIGKVRIRLSTLETDRVYTHYYPLLVLQPNGLKKNGELHLAVRFTCTAWVNMVAQYGRPLLPKMHYVQPIPVRHIDWLRYQAMQIVAARLARAEPPLRRESVEYMLDVDYHMWSLRRSKANFHRIMSLLSGFTAVCKWLNDICTWRNPVTTCLVHVLFLILVCYPELILPTIFLYLFVIGIWNYRFRPRNPPHMDARLSQAEAVHPDELDEEFDTFPTTRPSDIVRMRYDRLRSVAGRVQTVVGDLATQGERAQAILSWRDSRATSIFIIFSLIWAVFIYITPFQVIAIIVGIFMLRHPRFRSKMPSVPVNFFKRLPSKSDSMF* | 1045 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa7g3333 | 1044 | MobiDBLite | consensus disorder prediction | 173 | 192 | - | - | |
| Psa7g3333 | 1044 | PANTHER | PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 | 2 | 1042 | - | - | |
| Psa7g3333 | 1044 | MobiDBLite | consensus disorder prediction | 199 | 216 | - | - | |
| Psa7g3333 | 1044 | Pfam | C2 domain | 473 | 577 | IPR000008 | - | |
| Psa7g3333 | 1044 | Pfam | C2 domain | 4 | 99 | IPR000008 | - | |
| Psa7g3333 | 1044 | Pfam | C2 domain | 637 | 744 | IPR000008 | - | |
| Psa7g3333 | 1044 | Pfam | C2 domain | 312 | 413 | IPR000008 | - | |
| Psa7g3333 | 1044 | SMART | C2_3c | 4 | 107 | IPR000008 | - | |
| Psa7g3333 | 1044 | SMART | C2_3c | 473 | 571 | IPR000008 | - | |
| Psa7g3333 | 1044 | SMART | C2_3c | 638 | 741 | IPR000008 | - | |
| Psa7g3333 | 1044 | SMART | C2_3c | 311 | 407 | IPR000008 | - | |
| Psa7g3333 | 1044 | CDD | C2B_MCTP_PRT_plant | 311 | 436 | - | - | |
| Psa7g3333 | 1044 | Gene3D | C2 domain | 1 | 124 | IPR035892 | - | |
| Psa7g3333 | 1044 | ProSiteProfiles | C2 domain profile. | 620 | 742 | IPR000008 | - | |
| Psa7g3333 | 1044 | Gene3D | C2 domain | 297 | 434 | IPR035892 | - | |
| Psa7g3333 | 1044 | Gene3D | C2 domain | 455 | 607 | IPR035892 | - | |
| Psa7g3333 | 1044 | CDD | C2C_MCTP_PRT_plant | 473 | 626 | - | - | |
| Psa7g3333 | 1044 | CDD | C2D_MCTP_PRT_plant | 638 | 761 | - | - | |
| Psa7g3333 | 1044 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 472 | 628 | IPR035892 | - | |
| Psa7g3333 | 1044 | MobiDBLite | consensus disorder prediction | 173 | 230 | - | - | |
| Psa7g3333 | 1044 | Coils | Coil | 176 | 196 | - | - | |
| Psa7g3333 | 1044 | Gene3D | C2 domain | 635 | 768 | IPR035892 | - | |
| Psa7g3333 | 1044 | ProSiteProfiles | C2 domain profile. | 293 | 413 | IPR000008 | - | |
| Psa7g3333 | 1044 | Pfam | Plant phosphoribosyltransferase C-terminal | 889 | 1044 | IPR013583 | - | |
| Psa7g3333 | 1044 | ProSiteProfiles | C2 domain profile. | 1 | 114 | IPR000008 | - | |
| Psa7g3333 | 1044 | PANTHER | BNAA09G30540D PROTEIN | 2 | 1042 | - | - | |
| Psa7g3333 | 1044 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 117 | IPR035892 | - | |
| Psa7g3333 | 1044 | ProSiteProfiles | C2 domain profile. | 452 | 577 | IPR000008 | - | |
| Psa7g3333 | 1044 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 311 | 450 | IPR035892 | - | |
| Psa7g3333 | 1044 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 637 | 770 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa7g3333 | Psa-Chr7 | 254683910 | 254687044 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa7g3333 | 2 | 1044 | Lipid Metabolism Gene Families | AT1G22610 | 67.793 | 0.0 | 1449 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa7g3333 | - | - | cam:101494825 | 1687.93 |