Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3304 ATGGTTGAATCAGAACCTAAATTTTATATACCAGAGTCATTTCAGGTGAACTATGATGTGTCAAGTCAATTTAAGATGATTTGGAATGTGATGAAAGCACCATTGATTGTTCCTTTTTTGAATGCTTGTGTTTACATTTCATTAGCAATGGCTCTTATGCTTTTCATGGAGAGGGTTTATATGGGTATTGTTATTGTTTTGATTAAACTCTTCTGGAAGAAACCTGAACAACGTTATAACTATGAGCCTCTTCAAGACGATGAAGAACTCGGTGGCTCTAATTTCCCTGTTGTTCTTGTTCAAATTCCAATGTTCAATGAAAGAGAGGTGTACAAGGTTTCGATTGGAGCTGCTTGTGGCCTTTCGTGGCCTACGGATCGACTCGTGATCCAAGTTCTCGACGATTCTACGGACCCTGTTGTTAAGCAAATGGTGGAGATGGAATGCCAACGATGGGCGAGTAAAGGAATAAATATAACATACCAAATAAGAGAAAACAGAGTTGGTTACAAAGCTGGTGCATTGAAAGAAGGATTAAAACGTAGCTATGTTAAACATTGTGAATATGTTGTTATTTTCGATGCTGATTTTAGTCCACCACCTGATTTTCTCAGAAGAGGCATTCCTTTTCTTGTTGGAAATCCTGAACTTGCTCTTGTTCAAGGTCGTTGGCGATTTGTGAATGCTAATGAGTGTTTGTTGACAAGAATGCAAGAGATGTCTTTGGATTATCATTTCACAGTTGAGCAAGAAGTTGGTTCAGCTACTCATGCTTTCTTTGGTTTCAATGGCACTGCTGGTATTTGGAGAATAGCTGCTATCAACGAAGCGGGAGGGTGGAAAGACAGAACAACAGTCGAAGATATGGATCTCGCTGTCCGAGCAAGTCTTAGGGGATGGAAATTTTTGTACCTTGGTGATCTCCAGGCAAACAGCGAACTTCCGAGTACTTTGAGGGCCTTCAGATTCCAGCAGCATCGATGGTCGTGTGGTCCGGCTAATCTGTTCCGCAAAATGGCAATGGATATTATAAGGAACAAGAAAGTGAAGTTTTGGAAGAAAGTGTATGTCATATACAGCTTTTTCCTTGTTCGTAAAATCGTAGCTCACATGGTCACTTTCTTCTTCTACTGTCTCGTAATTCCTCTCACGATTTTGGTTCCCGAGGTTTATGTTCCAATTTGGGGAGCAGTTTATATTCCTTCCATCATCACCATTCTCAACTCCGTCGGAACACCAAGGTCAATTCACCTTTTGTTCTATTGGATCCTTTTCGAGAATGTCATGTCTCTGCATCGCACCAAGGCGACCCTTATCGGTTTGTTAGAATACGGAAGGGCCAACGAATGGGTTGTAACCGAAAAACTCGGAGATTCCGTTAACAACAATAAACTCAAATCTGATGCTGCAGCCAAGAAGGGCCATGTCAAAGTTCAAAAGAAAACAAGATCCAAATTTATGGAAAGGCTAAATTTGTTGGAGCTGGGATTTGCAGTCTTTCTCTTCTTCTGTGGATGCTATGATTATGTGCATGGAAAACACAACTACTTTATTTACCTCTTCCTTCAAACCTTAACCTTCACAATTGTAGGATTTGGTTATGTTGGAACCATAGTGTAA 1620 0.4043 MVESEPKFYIPESFQVNYDVSSQFKMIWNVMKAPLIVPFLNACVYISLAMALMLFMERVYMGIVIVLIKLFWKKPEQRYNYEPLQDDEELGGSNFPVVLVQIPMFNEREVYKVSIGAACGLSWPTDRLVIQVLDDSTDPVVKQMVEMECQRWASKGINITYQIRENRVGYKAGALKEGLKRSYVKHCEYVVIFDADFSPPPDFLRRGIPFLVGNPELALVQGRWRFVNANECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQANSELPSTLRAFRFQQHRWSCGPANLFRKMAMDIIRNKKVKFWKKVYVIYSFFLVRKIVAHMVTFFFYCLVIPLTILVPEVYVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATLIGLLEYGRANEWVVTEKLGDSVNNNKLKSDAAAKKGHVKVQKKTRSKFMERLNLLELGFAVFLFFCGCYDYVHGKHNYFIYLFLQTLTFTIVGFGYVGTIV* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3304 539 Pfam Glycosyl transferase family group 2 189 381 IPR001173 -
Psa7g3304 539 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 315 IPR029044 -
Psa7g3304 539 PANTHER BNAC09G36340D PROTEIN 5 539 - -
Psa7g3304 539 CDD CESA_CaSu_A2 96 332 - -
Psa7g3304 539 PANTHER - 5 539 - -
Psa7g3304 539 SUPERFAMILY Nucleotide-diphospho-sugar transferases 93 375 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3304 Psa-Chr7 250845083 250851531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3304 5 539 Miscellaneous Gene Families AT5G22740 79.516 0.0 888
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3304 K13680 - gmx:100802752 984.941