Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3298 ATGGTTTCAATAACAATTCACGATCATTCTTTCCATTCTACAACCAAATGCTTCGTCGTTCGATGCAATCACAGTAATGTTCAGGATATAGACGAGAAATCAAATTCGCTCTGGTTCCCTCCATTGAAAGCGACGAAGAGAGTGATTTTGGTTAGGCACGGACAGAGCACGTGGAATGCCGAGGGAAGAATTCAAGGTAGTTCTGATTTCTCTGTTCTTACCAAGAAAGGTGAGTCTCAGGCTGAGATTTCCCGCCAAATGCTCGCCGGCGACAACTTCGACGCTTGTTTCGCCAGTCCTTTGGCTCGATCAAAGAAAACCGCTGAAATCATTTGGGGACCTCGCCAACCGCCGATTATTCCTGAGTTCGATCTAAGAGAAATTGATTTGTACTCCTTTCAAGGTCTGTTGAAGGCCGAGGGAAAAGCGAGATTTGGTTCAGCTTTTCATCAATGGCAGGTGGATCCTGTGAATTTCGTCATTGATGATCATTATCCTGTGAGAGAGTTGTGGGATCGTGCTAGGAACTGCTGGACTAAAATTCTAGGTCATGATAGCAGGTCTGTTCTTGTCGTTGCCCATAATGCTGTTAATCAGGCTCTTGTTGCCACAGCAATTGGTCTGGAGGCAGAGTATTTCAGAACTTTACTTCAGAGCAACTGTGGTGTAAGTGTGCTGGACTTCACTCCAAGACCGGAGGGCGACTCTCCCCACATTTGCCTTAATCGCTTAAACCAGACCCCTGGTTCACCTGTTGCCGGAGGGAAATCTGGAGGTAGAGAGGCAAGCAAGCAGATCATACTCGTTTGTAATGGATCTACACAAAGAAATACAGAGGACGGTTTTATTTTTTCTGGTGATCAACCATTGAACATGCTTGGTGTTATACAGTCTCAGAAATCTGCAGAGCTACTTCTTGATTTGAAAGTGAGTTCCATAATTAGCAGTCCTAACAAATCTTGTATTGAGACAGCAGTGACCATTTCCCAGGTACAAGAAGCTGCAGATTGCTTGGGCGCTGACTCTGTGCCACGCTATGTTGAGATGAAGCAGGCGGAGAACCTTAATATTGAAACTATCTTTAAACAATCCAAAACGGATGTATCCAGTTTCCCTCCATTTCAGCCTGGATGGTTAAATAAAGTTGAAGATGACTCAAGAACAACATTATGGGATCAATCTGGAAAAGCCTGGCAATCCCTGCTGGATGAAATATCCGACGAATCTAAGTCAGGAGAGGTTATAGTTGCAGTTTGTCATCCTGCGATTCACATAGGGCTAATGGCGCACTGCCTTAACTTGACCAAGGAATGGCTGGGATCATTTCATCTTGATGCAGGGAGTGTTAGCGTCCTCGACTTCCCCGATGGACCTAAGGGAAGAGGCGTAATCAGGTGCATAAATTATACTGCACATTTGGGGAGATGGTCCATCCCTATCACAAGACCAACAGTTGATGTTCAACAGTTTTAG 1473 0.4494 MVSITIHDHSFHSTTKCFVVRCNHSNVQDIDEKSNSLWFPPLKATKRVILVRHGQSTWNAEGRIQGSSDFSVLTKKGESQAEISRQMLAGDNFDACFASPLARSKKTAEIIWGPRQPPIIPEFDLREIDLYSFQGLLKAEGKARFGSAFHQWQVDPVNFVIDDHYPVRELWDRARNCWTKILGHDSRSVLVVAHNAVNQALVATAIGLEAEYFRTLLQSNCGVSVLDFTPRPEGDSPHICLNRLNQTPGSPVAGGKSGGREASKQIILVCNGSTQRNTEDGFIFSGDQPLNMLGVIQSQKSAELLLDLKVSSIISSPNKSCIETAVTISQVQEAADCLGADSVPRYVEMKQAENLNIETIFKQSKTDVSSFPPFQPGWLNKVEDDSRTTLWDQSGKAWQSLLDEISDESKSGEVIVAVCHPAIHIGLMAHCLNLTKEWLGSFHLDAGSVSVLDFPDGPKGRGVIRCINYTAHLGRWSIPITRPTVDVQQF* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3298 490 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 50 59 IPR001345 GO:0003824
Psa7g3298 490 SMART PGAM_5 265 427 IPR013078 -
Psa7g3298 490 SMART PGAM_5 47 201 IPR013078 -
Psa7g3298 490 Coils Coil 488 490 - -
Psa7g3298 490 Pfam Histidine phosphatase superfamily (branch 1) 266 457 IPR013078 -
Psa7g3298 490 Pfam Histidine phosphatase superfamily (branch 1) 48 230 IPR013078 -
Psa7g3298 490 SUPERFAMILY Phosphoglycerate mutase-like 264 478 IPR029033 -
Psa7g3298 490 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 31 488 - -
Psa7g3298 490 Gene3D - 258 477 IPR029033 -
Psa7g3298 490 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 31 488 - -
Psa7g3298 490 CDD HP_PGM_like 47 234 IPR013078 -
Psa7g3298 490 CDD HP_PGM_like 265 465 IPR013078 -
Psa7g3298 490 Gene3D - 47 233 IPR029033 -
Psa7g3298 490 SUPERFAMILY Phosphoglycerate mutase-like 45 230 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3298 Psa-Chr7 249420576 249426251 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3298 K22200 - gmx:100794084 780.015