Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3289 ATGAACTCTGGAATGATGCAAAACTTTCTGAAGGGAAAGACTATTTTAGTGACTGGCACAACAGGTTTCTTAGCAAAAGTTTTTGTGGAAAAGATACTACGGATTCAACCAGAGATACAGAAGCTTTATCTTCTAGTAAGGTCTTCAAATACCGACTTGGCCTCAAATCGTTTGCAAAATGAGGTATTTAGGACAGATTTATTTCAACTGCTAAGAGAAAAGTTGGGTGGAGATTTTAATTCTTTCATATCAAAGAAGGTTGTGGCAGTTGCAGGAGATGTTGCTATTGAAAATTTGGGAATAAAAGATGAAAAGCTTAAAAATGTGATGTTTGAAGAGATAGACATTATTGTCAATTCTGCTGCAACTACCAATTTTGATGAAAGATTTGACACTTCCATGGGTGTTAATACAATGGGTGCTTTACATGTCTTAAACTTTGCAAAAAAGTGTCACAAAATAAAGCTTCTTGTCCACATATCAACCGCTTATGTGTGCGGAGAGGCTAAGGAAGGAGAATCAATTTTTGAAGAGAAAGCATTTAAAATGGGTCAATCTCTAAAAGGGACTTCAAAACTAGACATAAACACAGAAGTAGATTTGTTGGAGAAAAAACTAGATGATTTTAGAGCAATGAATGTGGATGAAAACACAATCAAATATGCATTGAAAGACTATGGGATTGAAAGAGCAAATTTGCATGGTTGGCCAAACACATATGTATTCACAAAAGCAATGGGAGAAATGCTTTTAGTGCATCATAAAGATAATGTTTCATTGATCATTATTCGTCCAACAATGGTAACTAGTACTATCAAGGATCCATTTCCTGGTTGGATTGAAGGTTTAAGAACTGTTGATAGTATGATATGTGCCTTTGGCAAAGGGAAACTGCCATGTTTTCTTGGCCATCCCAAGACAGTTTTAGATATAATGCCTGTAGATTTGGTCATCAATTGTGTGATTGCAACCATTGTTATCAACTCAAATCAAGCTCCTAAAAGCTTCATCTACAATGTTTCTTCTTCATTAAGAAACCCTCTTAAAATTTCTGATGTTCACAACATTTCACATCAATATTTCATGAAAACCCCTTGCATCAACAAAAATGGAAAGCTGATACTCGTCTCCAAGGGAATTGCCTTGAAAAGTTTGGCTGCTTTCAACATTTATACAGAGATCAAATATGTCCTCCCACTTAAGGTCTTACACTTGGTGAACAAGATGGTTTGCCATTCCTATCAAGATGTTTATGATGACAACTTCAAGAAAATTAGAATGGTGAAACGACTTGCAAAACTATACAAACCTTACGTGTTTTTTAAGGCAGTCTTTGATGATACCAACACAGAAAATTTACGAAGGGAAACAAAGGTATATAACATGAAGGATGAGAATCTAGAATTTGACCCTAGTAGCATTAATTGGAAAGACTACATGATGAATACACACATTCCTGGACTTGTCAAATATGCGATGAAATAA 1485 0.3515 MNSGMMQNFLKGKTILVTGTTGFLAKVFVEKILRIQPEIQKLYLLVRSSNTDLASNRLQNEVFRTDLFQLLREKLGGDFNSFISKKVVAVAGDVAIENLGIKDEKLKNVMFEEIDIIVNSAATTNFDERFDTSMGVNTMGALHVLNFAKKCHKIKLLVHISTAYVCGEAKEGESIFEEKAFKMGQSLKGTSKLDINTEVDLLEKKLDDFRAMNVDENTIKYALKDYGIERANLHGWPNTYVFTKAMGEMLLVHHKDNVSLIIIRPTMVTSTIKDPFPGWIEGLRTVDSMICAFGKGKLPCFLGHPKTVLDIMPVDLVINCVIATIVINSNQAPKSFIYNVSSSLRNPLKISDVHNISHQYFMKTPCINKNGKLILVSKGIALKSLAAFNIYTEIKYVLPLKVLHLVNKMVCHSYQDVYDDNFKKIRMVKRLAKLYKPYVFFKAVFDDTNTENLRRETKVYNMKDENLEFDPSSINWKDYMMNTHIPGLVKYAMK* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3289 494 PANTHER FATTY ACYL-COA REDUCTASE 6 491 - -
Psa7g3289 494 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 330 IPR036291 -
Psa7g3289 494 Pfam Male sterility protein 17 320 IPR013120 -
Psa7g3289 494 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 491 IPR026055 GO:0080019
Psa7g3289 494 CDD FAR-N_SDR_e 13 365 - -
Psa7g3289 494 CDD FAR_C 394 493 IPR033640 -
Psa7g3289 494 Gene3D - 5 378 - -
Psa7g3289 494 Pfam Male sterility protein 396 494 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3289 Psa-Chr7 248666777 248670030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3289 8 445 Acyl Lipid Metabolism Gene Families AT3G44560 51.364 1.13e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3289 K13356 - rcu:8277590 544.273