Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g3288 ATGGGTGTGTCATTAAATGGAGTAACAGGATTAGACATTAATGTGGAAAAGAAAGTTGTTGAAGAAAAATTGAAAATGCTTCAACAAAAAGGAGCTTCTGATAATGATGTTAAATTTGCCATGAAGGATTTGGGCATCAAAAGAGCAAAAATGTATGGATGGCCAAACACATATGTGTTTACAAAAGCAATGGGAGAAATGCTTGTTGGAACTATGAAGGAAAATCTGCCCATTGTTATTGTTCGTCCTACAATGATTACAAGCACTTACAAAGAACCTTTCCCTGGTTGGGTTGAAGGAGTAAGAACCATAGACAGTATAATTGTGGCTTATGGTAAAGGAAAATTAACATGCTTCCTTGCTGACATTGAAGCTGTTTTTGATGTGATTCCCGCTGATATAGTGGTGAATGCAATGATGGTGGCAATGGCGAAACATGCTAATCAATCTATTGATGATAACATATATCATGTGGGTTCTTCTGTTGGAAATCCAGTTAGATATCGTAATCTCAAAGATTACACTTTCAGATATTTTACTGCAAAACCATGTTTAGACAAAGAAGGAAAACTCATCAAGGTTGGCACAGTTACGGTTTTGGAAAACATGAATAGCTTCCAAAGATACATGTTCATTCGATACATGCTTCCGCTCAAGGGACTAGAGCTGGTGAATACGACCTTTTGTCACTTTTTTGATGGAACTTATTTTGATATTAACAAGAAGGTCCAAACCGTGATGCGCTTGGTTGATCTCTACAAACCCTATTTGTTCTTCGACGGCTTATTCGATAATACGAACGCGGAGAAGATGCAAAAAGAAGCAAGACAAAGTGGGGTGGAGATGGATTTGTTTTACTTTGACCCCAAGATGATTGACTGGGAAGACTACTTCATGAATGTTCACATTCCTGGCATTGTCAAATATTGCTTCAAGTGA 939 0.3759 MGVSLNGVTGLDINVEKKVVEEKLKMLQQKGASDNDVKFAMKDLGIKRAKMYGWPNTYVFTKAMGEMLVGTMKENLPIVIVRPTMITSTYKEPFPGWVEGVRTIDSIIVAYGKGKLTCFLADIEAVFDVIPADIVVNAMMVAMAKHANQSIDDNIYHVGSSVGNPVRYRNLKDYTFRYFTAKPCLDKEGKLIKVGTVTVLENMNSFQRYMFIRYMLPLKGLELVNTTFCHFFDGTYFDINKKVQTVMRLVDLYKPYLFFDGLFDNTNAEKMQKEARQSGVEMDLFYFDPKMIDWEDYFMNVHIPGIVKYCFK* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g3288 312 Pfam Male sterility protein 213 312 IPR033640 -
Psa7g3288 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 52 184 IPR036291 -
Psa7g3288 312 Pfam Male sterility protein 25 139 IPR013120 -
Psa7g3288 312 Gene3D - 14 207 - -
Psa7g3288 312 PANTHER FATTY ACYL-COA REDUCTASE 1 310 - -
Psa7g3288 312 PANTHER MALE STERILITY PROTEIN 2-RELATED 1 310 IPR026055 GO:0080019
Psa7g3288 312 CDD FAR_C 212 311 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g3288 Psa-Chr7 248473857 248482527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g3288 1 311 Acyl Lipid Metabolism Gene Families AT4G33790 58.199 2.48e-141 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g3288 K13356 - gmx:100788994 467.618